RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 PARP9Q8IXQ6 854 aa9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 SEPT12Q8IYM1 358 aa9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 SEPT9Q9UHD8 586 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 ZFYVE9O95405 1425 aa9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 ADAMTS13Q76LX8 1427 aa9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 CASKIN1Q8WXD9 1431 aa9.7□□□□□ -0.86
ECHDC1-202ENST00000368289 HRO43593 1189 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 MYOM2P54296 1465 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 SF3B2Q13435 895 aaKnown RBP9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 RSPH4AQ5TD94 716 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 CCNB3Q8WWL7 1395 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 KDM4CQ9H3R0 1056 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 TMEM134Q9H6X4 195 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 PCDH10Q9P2E7 1040 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 TBX22Q9Y458 520 aa9.69□□□□□ -0.86
ECHDC1-202ENST00000368289 CEP152O94986 1710 aa9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 PLEKHG1Q9ULL1 1385 aa9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 KRTAP3-3Q9BYR6 98 aa9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
ECHDC1-202ENST00000368289 CCDC18Q5T9S5 1454 aa9.67□□□□□ -0.86
ECHDC1-202ENST00000368289 BAG6P46379 1132 aa9.67□□□□□ -0.86
ECHDC1-202ENST00000368289 EZH2Q15910 746 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-202ENST00000368289 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
ECHDC1-202ENST00000368289 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
ECHDC1-202ENST00000368289 DCCP43146 1447 aa9.66□□□□□ -0.86
ECHDC1-202ENST00000368289 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-202ENST00000368289 CCDC141Q6ZP82 1450 aa9.66□□□□□ -0.86
ECHDC1-202ENST00000368289 CEP162Q5TB80 1403 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 KRT27Q7Z3Y8 459 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 ZFRQ96KR1 1074 aaKnown RBP9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 SLIT2O94813 1529 aa9.65□□□□□ -0.86
ECHDC1-202ENST00000368289 NINLQ9Y2I6 1382 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 LAMC1P11047 1609 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 FAM182BQ5T319 152 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 UNC5CLQ8IV45 518 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 NLRP7Q8WX94 980 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 AMOTL2Q9Y2J4 779 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
ECHDC1-202ENST00000368289 SWT1Q5T5J6 900 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-202ENST00000368289 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
ECHDC1-202ENST00000368289 ORAI2Q96SN7 254 aa9.63□□□□□ -0.87
ECHDC1-202ENST00000368289 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-202ENST00000368289 COL22A1Q8NFW1 1626 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-202ENST00000368289 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
ECHDC1-202ENST00000368289 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-202ENST00000368289 TMEM132AQ24JP5 1023 aa9.62□□□□□ -0.87
ECHDC1-202ENST00000368289 NOS1P29475 1434 aa9.62□□□□□ -0.87
ECHDC1-202ENST00000368289 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 C1orf167Q5SNV9 1468 aa9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 LRCH3Q96II8 777 aa9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 TRPM2O94759 1503 aa9.61□□□□□ -0.87
ECHDC1-202ENST00000368289 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-202ENST00000368289 RIMS2Q9UQ26 1411 aa9.6□□□□□ -0.87
ECHDC1-202ENST00000368289 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
ECHDC1-202ENST00000368289 ADGRL3Q9HAR2 1447 aa9.59□□□□□ -0.87
ECHDC1-202ENST00000368289 KCNQ2O43526 872 aa9.59□□□□□ -0.87
ECHDC1-202ENST00000368289 MS4A1P11836 297 aa9.59□□□□□ -0.87
ECHDC1-202ENST00000368289 RDH13Q8NBN7 331 aa9.59□□□□□ -0.87
ECHDC1-202ENST00000368289 WNT2BQ93097 391 aa9.59□□□□□ -0.87
ECHDC1-202ENST00000368289 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
ECHDC1-202ENST00000368289 CD46P15529 392 aa9.58□□□□□ -0.88
ECHDC1-202ENST00000368289 VPS72Q15906 364 aa9.58□□□□□ -0.88
ECHDC1-202ENST00000368289 IL27Q8NEV9 243 aa9.58□□□□□ -0.88
ECHDC1-202ENST00000368289 BEGAINQ9BUH8 593 aa9.58□□□□□ -0.88
ECHDC1-202ENST00000368289 PDGFDQ9GZP0 370 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-202ENST00000368289 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 RNF40O75150 1001 aa9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 FAM117AQ9C073 453 aa9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 RSPH6AQ9H0K4 717 aa9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 SPON1Q9HCB6 807 aa9.57□□□□□ -0.88
ECHDC1-202ENST00000368289 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
ECHDC1-202ENST00000368289 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
ECHDC1-202ENST00000368289 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
ECHDC1-202ENST00000368289 MARF1Q9Y4F3 1742 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-202ENST00000368289 FYCO1Q9BQS8 1478 aa9.55□□□□□ -0.88
ECHDC1-202ENST00000368289 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-202ENST00000368289 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
ECHDC1-202ENST00000368289 PRR14Q9BWN1 585 aa9.55□□□□□ -0.88
ECHDC1-202ENST00000368289 XRN1Q8IZH2 1706 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-202ENST00000368289 ARHGEF5Q12774 1597 aa9.54□□□□□ -0.88
ECHDC1-202ENST00000368289 MYO5BQ9ULV0 1848 aa9.54□□□□□ -0.88
ECHDC1-202ENST00000368289 PXDNQ92626 1479 aa9.54□□□□□ -0.88
ECHDC1-202ENST00000368289 PPP4CP60510 307 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms