RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 ZCCHC17Q9NP64 241 aaKnown RBP10.06□□□□□ -0.8
CD46-209ENST00000367047 ABCC2Q92887 1545 aa10.06□□□□□ -0.8
CD46-209ENST00000367047 HTATSF1O43719 755 aaKnown RBP10.06□□□□□ -0.8
CD46-209ENST00000367047 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
CD46-209ENST00000367047 SMARCE1Q969G3 411 aa10.06□□□□□ -0.8
CD46-209ENST00000367047 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
CD46-209ENST00000367047 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.06□□□□□ -0.8
CD46-209ENST00000367047 PRAG1Q86YV5 1406 aa10.06□□□□□ -0.8
CD46-209ENST00000367047 GSPT1P15170 499 aaKnown RBP10.05□□□□□ -0.8
CD46-209ENST00000367047 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.05□□□□□ -0.8
CD46-209ENST00000367047 BRMS1Q9HCU9 246 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 EXOC6BQ9Y2D4 811 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 PLA2G4AP47712 749 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 ERCC6LQ2NKX8 1250 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
CD46-209ENST00000367047 RRP15Q9Y3B9 282 aaKnown RBP10.05□□□□□ -0.8
CD46-209ENST00000367047 PNMA6AP0CW24 399 aaPredicted RBP10.05□□□□□ -0.8
CD46-209ENST00000367047 ERO1AQ96HE7 468 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 DEF6Q9H4E7 631 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 CWC15Q9P013 229 aaKnown RBP10.05□□□□□ -0.8
CD46-209ENST00000367047 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
CD46-209ENST00000367047 GPS2Q13227 327 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 ZSCAN25Q6NSZ9 544 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 TRMT1Q9NXH9 659 aaKnown RBP10.04□□□□□ -0.8
CD46-209ENST00000367047 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 A0A1B0GUL7 405 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 TPM4P67936 248 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 PTPN14Q15678 1187 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 TTC31Q49AM3 519 aaPredicted RBP10.04□□□□□ -0.8
CD46-209ENST00000367047 DNAJC21Q5F1R6 531 aaKnown RBP10.04□□□□□ -0.8
CD46-209ENST00000367047 TRIM5Q9C035 493 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 WDR7Q9Y4E6 1490 aa10.04□□□□□ -0.8
CD46-209ENST00000367047 SPAG9O60271 1321 aaKnown RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 USP27XA6NNY8 438 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 CLCN6P51797 869 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 TMED8Q6PL24 325 aaPredicted RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 SRLQ86TD4 932 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 CFDP1Q9UEE9 299 aaPredicted RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 PTPRCP08575 1304 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 SLU7O95391 586 aaKnown RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 INTS3Q68E01 1043 aaKnown RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 LUZP1Q86V48 1076 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 GCC1Q96CN9 775 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 FIBPO43427 364 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 CACTINQ8WUQ7 758 aaKnown RBP10.03□□□□□ -0.8
CD46-209ENST00000367047 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
CD46-209ENST00000367047 MRC2Q9UBG0 1479 aa10.02□□□□□ -0.8
CD46-209ENST00000367047 CHMP3Q9Y3E7 222 aa10.02□□□□□ -0.81
CD46-209ENST00000367047 GRIN2AQ12879 1464 aa10.02□□□□□ -0.81
CD46-209ENST00000367047 ANKRD50Q9ULJ7 1429 aa10.02□□□□□ -0.81
CD46-209ENST00000367047 NOM1Q5C9Z4 860 aaKnown RBP10.02□□□□□ -0.81
CD46-209ENST00000367047 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
CD46-209ENST00000367047 CXorf56Q9H5V9 222 aa10.02□□□□□ -0.81
CD46-209ENST00000367047 CCDC27Q2M243 656 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
CD46-209ENST00000367047 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
CD46-209ENST00000367047 ATP2B1P20020 1258 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 LMAN1P49257 510 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 FUCA2Q9BTY2 467 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 ASXL1Q8IXJ9 1541 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 TARBP1Q13395 1621 aaKnown RBP10.01□□□□□ -0.81
CD46-209ENST00000367047 CCDC192P0DO97 292 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 H2AFXP16104 143 aaPredicted RBP10.01□□□□□ -0.81
CD46-209ENST00000367047 ARHGAP29Q52LW3 1261 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 CASC1Q6TDU7 716 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
CD46-209ENST00000367047 SYTL4Q96C24 671 aaPredicted RBP10.01□□□□□ -0.81
CD46-209ENST00000367047 APBB1O00213 710 aa10□□□□□ -0.81
CD46-209ENST00000367047 UBE2HP62256 183 aa10□□□□□ -0.81
CD46-209ENST00000367047 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
CD46-209ENST00000367047 TMCO3Q6UWJ1 677 aa10□□□□□ -0.81
CD46-209ENST00000367047 PHF23Q9BUL5 403 aaPredicted RBP10□□□□□ -0.81
CD46-209ENST00000367047 SRCIN1Q9C0H9 1055 aa10□□□□□ -0.81
CD46-209ENST00000367047 SUFUQ9UMX1 484 aa10□□□□□ -0.81
CD46-209ENST00000367047 ANKRD65E5RJM6 399 aa10□□□□□ -0.81
CD46-209ENST00000367047 TDO2P48775 406 aa10□□□□□ -0.81
CD46-209ENST00000367047 ARID5BQ14865 1188 aa10□□□□□ -0.81
CD46-209ENST00000367047 EGFL6Q8IUX8 553 aa10□□□□□ -0.81
CD46-209ENST00000367047 LRRN4CLQ8ND94 238 aa10□□□□□ -0.81
CD46-209ENST00000367047 FBXO18Q8NFZ0 1043 aa10□□□□□ -0.81
CD46-209ENST00000367047 ERBB3P21860 1342 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 WDR33Q9C0J8 1336 aaKnown RBP9.99□□□□□ -0.81
CD46-209ENST00000367047 OAS2P29728 719 aaKnown RBP9.99□□□□□ -0.81
CD46-209ENST00000367047 CAMK4Q16566 473 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 GORABQ5T7V8 394 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 CCDC91Q7Z6B0 441 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 DONSONQ9NYP3 566 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 SAMD9Q5K651 1589 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 DNMT1P26358 1616 aaKnown RBP9.99□□□□□ -0.81
CD46-209ENST00000367047 POLA1P09884 1462 aaPredicted RBP9.99□□□□□ -0.81
CD46-209ENST00000367047 SEC31AO94979 1220 aaKnown RBP9.99□□□□□ -0.81
CD46-209ENST00000367047 FAM200AQ8TCP9 573 aa9.99□□□□□ -0.81
CD46-209ENST00000367047 SATB1Q01826 763 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms