RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 WNK3Q9BYP7 1800 aa8.6□□□□□ -1.03
SUDS3-201ENST00000360286 U2AF1L5P0DN76 240 aaPredicted RBP8.6□□□□□ -1.03
SUDS3-201ENST00000360286 U2AF1Q01081 240 aaKnown RBP eCLIP8.6□□□□□ -1.03
SUDS3-201ENST00000360286 NCAPD2Q15021 1401 aa8.6□□□□□ -1.03
SUDS3-201ENST00000360286 RGPD1P0DJD0 1748 aa8.6□□□□□ -1.03
SUDS3-201ENST00000360286 KAT6BQ8WYB5 2073 aa8.59□□□□□ -1.03
SUDS3-201ENST00000360286 PARP4Q9UKK3 1724 aaKnown RBP8.59□□□□□ -1.03
SUDS3-201ENST00000360286 OVOS2A0A0G2JMS6 1433 aa8.58□□□□□ -1.04
SUDS3-201ENST00000360286 CYP27B1O15528 508 aa8.58□□□□□ -1.04
SUDS3-201ENST00000360286 PLEKHO1Q53GL0 409 aaPredicted RBP8.58□□□□□ -1.04
SUDS3-201ENST00000360286 RSPH6AQ9H0K4 717 aa8.58□□□□□ -1.04
SUDS3-201ENST00000360286 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
SUDS3-201ENST00000360286 KDRP35968 1356 aa8.58□□□□□ -1.04
SUDS3-201ENST00000360286 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
SUDS3-201ENST00000360286 PRKAR2BP31323 418 aa8.57□□□□□ -1.04
SUDS3-201ENST00000360286 PTF1AQ7RTS3 328 aa8.57□□□□□ -1.04
SUDS3-201ENST00000360286 MIER1Q8N108 512 aa8.57□□□□□ -1.04
SUDS3-201ENST00000360286 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
SUDS3-201ENST00000360286 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
SUDS3-201ENST00000360286 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
SUDS3-201ENST00000360286 TNS2Q63HR2 1409 aa8.56□□□□□ -1.04
SUDS3-201ENST00000360286 FCHSD2O94868 740 aa8.56□□□□□ -1.04
SUDS3-201ENST00000360286 MTHFSDQ2M296 383 aaKnown RBP8.56□□□□□ -1.04
SUDS3-201ENST00000360286 FAM196AQ6ZSG2 479 aa8.56□□□□□ -1.04
SUDS3-201ENST00000360286 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
SUDS3-201ENST00000360286 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
SUDS3-201ENST00000360286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
SUDS3-201ENST00000360286 SHANK3Q9BYB0 1731 aa8.56□□□□□ -1.04
SUDS3-201ENST00000360286 KCNQ2O43526 872 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 TRIM37O94972 964 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 PHKG2P15735 406 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 WDR43Q15061 677 aaKnown RBP eCLIP8.55□□□□□ -1.04
SUDS3-201ENST00000360286 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 ZNF530Q6P9A1 599 aaPredicted RBP8.55□□□□□ -1.04
SUDS3-201ENST00000360286 CCDC146Q8IYE0 955 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
SUDS3-201ENST00000360286 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
SUDS3-201ENST00000360286 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
SUDS3-201ENST00000360286 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
SUDS3-201ENST00000360286 NKX1-1Q15270 411 aaPredicted RBP8.54□□□□□ -1.04
SUDS3-201ENST00000360286 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
SUDS3-201ENST00000360286 EP400Q96L91 3159 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 SBF2Q86WG5 1849 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 SOCS7O14512 581 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
SUDS3-201ENST00000360286 AKAP4Q5JQC9 854 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 C1orf141Q5JVX7 400 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
SUDS3-201ENST00000360286 APBA3O96018 575 aa8.52□□□□□ -1.05
SUDS3-201ENST00000360286 DEFB132Q7Z7B7 95 aa8.52□□□□□ -1.05
SUDS3-201ENST00000360286 FAM9BQ8IZU0 186 aa8.52□□□□□ -1.05
SUDS3-201ENST00000360286 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
SUDS3-201ENST00000360286 SYTL4Q96C24 671 aaPredicted RBP8.52□□□□□ -1.05
SUDS3-201ENST00000360286 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
SUDS3-201ENST00000360286 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
SUDS3-201ENST00000360286 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
SUDS3-201ENST00000360286 RNMTO43148 476 aaKnown RBP8.51□□□□□ -1.05
SUDS3-201ENST00000360286 IL17REQ8NFR9 667 aa8.51□□□□□ -1.05
SUDS3-201ENST00000360286 RUNDC1Q96C34 613 aa8.51□□□□□ -1.05
SUDS3-201ENST00000360286 BCL11BQ9C0K0 894 aaPredicted RBP8.51□□□□□ -1.05
SUDS3-201ENST00000360286 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
SUDS3-201ENST00000360286 BCL9O00512 1426 aa8.51□□□□□ -1.05
SUDS3-201ENST00000360286 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 NEFMP07197 916 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 HSP90AB1P08238 724 aaKnown RBP8.5□□□□□ -1.05
SUDS3-201ENST00000360286 TMPOP42166 694 aaKnown RBP8.5□□□□□ -1.05
SUDS3-201ENST00000360286 RIPK4P57078 832 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
SUDS3-201ENST00000360286 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
SUDS3-201ENST00000360286 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 NEUROD2Q15784 382 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 NFE2L2Q16236 605 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 MCM10Q7L590 875 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 CCDC125Q86Z20 511 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 NFATC2IPQ8NCF5 419 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 PIGBQ92521 554 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 MAPK8IP3Q9UPT6 1336 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 ITGB4P16144 1822 aa8.5□□□□□ -1.05
SUDS3-201ENST00000360286 DOT1LQ8TEK3 1739 aa8.49□□□□□ -1.05
SUDS3-201ENST00000360286 KDM6AO15550 1401 aaPredicted RBP8.49□□□□□ -1.05
SUDS3-201ENST00000360286 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
SUDS3-201ENST00000360286 APAF1O14727 1248 aa8.49□□□□□ -1.05
SUDS3-201ENST00000360286 CABP4P57796 275 aa8.49□□□□□ -1.05
SUDS3-201ENST00000360286 EZH2Q15910 746 aaKnown RBP8.49□□□□□ -1.05
SUDS3-201ENST00000360286 VIRMAQ69YN4 1812 aaKnown RBP8.49□□□□□ -1.05
SUDS3-201ENST00000360286 TOGARAM1Q9Y4F4 1720 aa8.49□□□□□ -1.05
SUDS3-201ENST00000360286 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 PROM2Q8N271 834 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 RTF1Q92541 710 aaKnown RBP8.48□□□□□ -1.05
SUDS3-201ENST00000360286 CAMKK2Q96RR4 588 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 THUMPD2Q9BTF0 503 aaKnown RBP8.48□□□□□ -1.05
SUDS3-201ENST00000360286 TMOD3Q9NYL9 352 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 ASAP1Q9ULH1 1129 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 SCN11AQ9UI33 1791 aa8.48□□□□□ -1.05
SUDS3-201ENST00000360286 NHSQ6T4R5 1651 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms