RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 ANKRD18AQ8IVF6 992 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 NECTIN2Q92692 538 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 CAMK4Q16566 473 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 KIAA1328Q86T90 577 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 LTV1Q96GA3 475 aaPredicted RBP10.28□□□□□ -0.76
COL6A6-201ENST00000358511 KIAA1107Q9UPP5 1409 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 CTAGE5O15320 804 aa10.28□□□□□ -0.76
COL6A6-201ENST00000358511 CCT4P50991 539 aaKnown RBP10.27□□□□□ -0.76
COL6A6-201ENST00000358511 ZNF428Q96B54 188 aa10.27□□□□□ -0.76
COL6A6-201ENST00000358511 TAX1BP1Q86VP1 789 aa10.27□□□□□ -0.76
COL6A6-201ENST00000358511 ANO10Q9NW15 660 aa10.27□□□□□ -0.76
COL6A6-201ENST00000358511 MTHFSP49914 203 aa10.27□□□□□ -0.77
COL6A6-201ENST00000358511 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
COL6A6-201ENST00000358511 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.77
COL6A6-201ENST00000358511 ZKSCAN5Q9Y2L8 839 aa10.27□□□□□ -0.77
COL6A6-201ENST00000358511 NF2P35240 595 aa10.27□□□□□ -0.77
COL6A6-201ENST00000358511 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
COL6A6-201ENST00000358511 SNW1Q13573 536 aaKnown RBP10.27□□□□□ -0.77
COL6A6-201ENST00000358511 SSFA2P28290 1259 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 SURF6O75683 361 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 PDRG1Q9NUG6 133 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 CDKL5O76039 1030 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 HMOX1P09601 288 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 EZRP15311 586 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 LRSAM1Q6UWE0 723 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 BAG4O95429 457 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 GBP2P32456 591 aaPredicted RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 FEZ1Q99689 392 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 PANK2Q9BZ23 570 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 URI1O94763 535 aaPredicted RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 ARFGAP3Q9NP61 516 aa10.26□□□□□ -0.77
COL6A6-201ENST00000358511 PCF11O94913 1555 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC43Q96MW1 224 aaKnown RBP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 SEPT11Q9NVA2 429 aaKnown RBP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 NUTM2DQ5VT03 806 aaPredicted RBP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 KRT32Q14532 448 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 STX1AQ16623 288 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC184Q52MB2 194 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 BLOC1S2Q6QNY1 142 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 NCOA1Q15788 1441 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 SLFN5Q08AF3 891 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 NOLC1Q14978 699 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 ZFYVE27Q5T4F4 411 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC83Q8IWF9 413 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 SH2B1Q9NRF2 756 aaPredicted RBP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 UBE2HP62256 183 aa10.25□□□□□ -0.77
COL6A6-201ENST00000358511 ZNF397Q8NF99 534 aaPredicted RBP10.25□□□□□ -0.77
COL6A6-201ENST00000358511 TSR2Q969E8 191 aaKnown RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 STK3Q13188 491 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 VPS37DQ86XT2 251 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 TRIM22Q8IYM9 498 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 CDK5RAP3Q96JB5 506 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 CCAR1Q8IX12 1150 aaKnown RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 SYCP1Q15431 976 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC150Q8NCX0 1101 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 RBM25P49756 843 aaKnown RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 MAP2K1Q02750 393 aaPredicted RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 TTC31Q49AM3 519 aaPredicted RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 RNF187Q5TA31 235 aaPredicted RBP10.24□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC91Q7Z6B0 441 aa10.24□□□□□ -0.77
COL6A6-201ENST00000358511 DDX19AQ9NUU7 478 aaKnown RBP10.23□□□□□ -0.77
COL6A6-201ENST00000358511 FGD5Q6ZNL6 1462 aa10.23□□□□□ -0.77
COL6A6-201ENST00000358511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL6A6-201ENST00000358511 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
COL6A6-201ENST00000358511 JAKMIP1Q96N16 626 aaKnown RBP10.23□□□□□ -0.77
COL6A6-201ENST00000358511 OGFRQ9NZT2 677 aa10.23□□□□□ -0.77
COL6A6-201ENST00000358511 GPRASP1Q5JY77 1395 aa10.23□□□□□ -0.77
COL6A6-201ENST00000358511 NEUROD6Q96NK8 337 aa10.23□□□□□ -0.77
COL6A6-201ENST00000358511 KIF4BQ2VIQ3 1234 aa10.22□□□□□ -0.77
COL6A6-201ENST00000358511 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
COL6A6-201ENST00000358511 MAP3K1Q13233 1512 aa10.22□□□□□ -0.77
COL6A6-201ENST00000358511 TRMT1Q9NXH9 659 aaKnown RBP10.22□□□□□ -0.77
COL6A6-201ENST00000358511 RASSF4Q9H2L5 321 aa10.22□□□□□ -0.77
COL6A6-201ENST00000358511 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
COL6A6-201ENST00000358511 MLECQ14165 292 aa10.22□□□□□ -0.77
COL6A6-201ENST00000358511 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
COL6A6-201ENST00000358511 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
COL6A6-201ENST00000358511 CCDC175P0C221 793 aa10.21□□□□□ -0.77
COL6A6-201ENST00000358511 ARHGAP5Q13017 1502 aa10.21□□□□□ -0.77
COL6A6-201ENST00000358511 GTF2E1P29083 439 aaPredicted RBP10.21□□□□□ -0.77
COL6A6-201ENST00000358511 V9GYY5 206 aaPredicted RBP10.21□□□□□ -0.77
COL6A6-201ENST00000358511 TUBB4AP04350 444 aa10.21□□□□□ -0.77
COL6A6-201ENST00000358511 BMP2KLQ5H9B9 411 aa10.21□□□□□ -0.77
COL6A6-201ENST00000358511 TERF1P54274 439 aa10.21□□□□□ -0.77
COL6A6-201ENST00000358511 SRRTQ9BXP5 876 aaKnown RBP10.21□□□□□ -0.77
COL6A6-201ENST00000358511 SPA17Q15506 151 aa10.21□□□□□ -0.78
COL6A6-201ENST00000358511 TUBB4BP68371 445 aa10.21□□□□□ -0.78
COL6A6-201ENST00000358511 TAF4BQ92750 862 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms