RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ZNF397Q8NF99 534 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 CTCFLQ8NI51 663 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 ABCA5Q8WWZ7 1642 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 SOX12O15370 315 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 TPD52L1Q16890 204 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 CT47A1Q5JQC4 288 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 FAM200AQ8TCP9 573 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 LLPHQ9BRT6 129 aaKnown RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 HSP90B1P14625 803 aaKnown RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 BLMP54132 1417 aaPredicted RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 KDM5DQ9BY66 1539 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 OLFM4Q6UX06 510 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 APPP05067 770 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC146Q8IYE0 955 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 CLASRPQ8N2M8 674 aaKnown RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC91Q7Z6B0 441 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 DDX58O95786 925 aaKnown RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 COG3Q96JB2 828 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 LARP1BQ659C4 914 aaKnown RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 TDRD9Q8NDG6 1382 aaKnown RBP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 ZSCAN12O43309 604 aa4.84□□□□□ -1.63
SYNE2-204ENST00000358025 SAFBQ15424 915 aaKnown RBP eCLIP4.84□□□□□ -1.63
SYNE2-204ENST00000358025 DNMBPQ6XZF7 1577 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 ADGRL2O95490 1459 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 TNNT1P13805 278 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 GTF2F1P35269 517 aaKnown RBP eCLIP4.84□□□□□ -1.64
SYNE2-204ENST00000358025 IMMTQ16891 758 aaKnown RBP4.84□□□□□ -1.64
SYNE2-204ENST00000358025 SPATS2Q86XZ4 545 aaKnown RBP4.84□□□□□ -1.64
SYNE2-204ENST00000358025 KIF1BPQ96EK5 621 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 TTC22Q5TAA0 569 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 PPP4R3BQ5MIZ7 849 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 LRRCC1Q9C099 1032 aa4.84□□□□□ -1.64
SYNE2-204ENST00000358025 U3KPZ7 1027 aaPredicted RBP4.84□□□□□ -1.64
SYNE2-204ENST00000358025 MPHOSPH8Q99549 860 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 PCDHB15Q9Y5E8 787 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 SHANK2Q9UPX8 1470 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 TRIM29Q14134 588 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 FAM135AQ9P2D6 1515 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 TM6SF1Q9BZW5 370 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 KIF3BO15066 747 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 SEMA3FQ13275 785 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 KIAA0754O94854 1291 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 BMP15O95972 392 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 IGHDP01880 384 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 SH3BGRP55822 239 aaPredicted RBP4.83□□□□□ -1.64
SYNE2-204ENST00000358025 EIF2AK4Q9P2K8 1649 aaKnown RBP4.83□□□□□ -1.64
SYNE2-204ENST00000358025 BCAR3O75815 825 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 GOLGA6L10A0A0M3HER8 536 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 ZNF165P49910 485 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 RAD50Q92878 1312 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 PPM1EQ8WY54 764 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 ERO1AQ96HE7 468 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 CFAP43Q8NDM7 1665 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 PPFIA3O75145 1194 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 BICD2Q8TD16 824 aa4.83□□□□□ -1.64
SYNE2-204ENST00000358025 SLC20A2Q08357 652 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 INCENPQ9NQS7 918 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 NOB1Q9ULX3 412 aaKnown RBP4.82□□□□□ -1.64
SYNE2-204ENST00000358025 CDKL5O76039 1030 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 SSH2Q76I76 1423 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 GOLGA6L10A6NI86 522 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 NUTM1Q86Y26 1132 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 CLSTN1O94985 981 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 RGS22Q8NE09 1264 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 SSH1Q8WYL5 1049 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 PHAXQ9H814 394 aaKnown RBP4.82□□□□□ -1.64
SYNE2-204ENST00000358025 TRDNQ13061 729 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 SMC2O95347 1197 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 CEP135Q66GS9 1140 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 EIF5P55010 431 aaKnown RBP4.82□□□□□ -1.64
SYNE2-204ENST00000358025 USP26Q9BXU7 913 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 C14orf93Q9H972 538 aaKnown RBP4.82□□□□□ -1.64
SYNE2-204ENST00000358025 IQCDQ96DY2 449 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 TMEM87AQ8NBN3 555 aa4.82□□□□□ -1.64
SYNE2-204ENST00000358025 FGFR1OPO95684 399 aaKnown RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 BRD3Q15059 726 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 TMX3Q96JJ7 454 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 GBP6Q6ZN66 633 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 PPFIBP1Q86W92 1011 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 POTEDQ86YR6 584 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 SLC26A8Q96RN1 970 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 LMNB2Q03252 620 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 NEXNQ0ZGT2 675 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 FBXO3Q9UK99 471 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 CCDC196A0A1B0GTZ2 297 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 KIF5CO60282 957 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 PDLIM2Q96JY6 352 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 GIGYF1O75420 1035 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 RRAGDQ9NQL2 400 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 NBPF7P0C2Y1 421 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 CUL4AQ13619 759 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 CROCCP2Q86T23 111 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 CEP112Q8N8E3 955 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 SPATA32Q96LK8 384 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 YEATS2Q9ULM3 1422 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 STX1AQ16623 288 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 KCNG4Q8TDN1 519 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 KIF21AQ7Z4S6 1674 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 UBTFL1P0CB47 393 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms