RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 API5Q9BZZ5 524 aaKnown RBP5.46□□□□□ -1.54
SYNE2-203ENST00000357395 CDC45O75419 566 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 PHAXQ9H814 394 aaKnown RBP5.46□□□□□ -1.54
SYNE2-203ENST00000357395 RBM10P98175 930 aaKnown RBP5.46□□□□□ -1.54
SYNE2-203ENST00000357395 ARHGAP24Q8N264 748 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 TAX1BP1Q86VP1 789 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CEP57Q86XR8 500 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CDKL5O76039 1030 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CEP135Q66GS9 1140 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 AP1ARQ63HQ0 302 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 P3H3Q8IVL6 736 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 SREK1Q8WXA9 508 aaKnown RBP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 C22orf23Q9BZE7 217 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 ATL3Q6DD88 541 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 TRIM35Q9UPQ4 493 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CCDC158Q5M9N0 1113 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 PPFIBP2Q8ND30 876 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 IRX4P78413 519 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 NBPF9Q3BBW0 867 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 FGFR1OPO95684 399 aaKnown RBP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 TSNAXIP1Q2TAA8 658 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 RLBP1P12271 317 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 ZSCAN31Q96LW9 406 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CCAR2Q8N163 923 aaKnown RBP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 RPGRIP1Q96KN7 1286 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 TRIM5Q9C035 493 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 MED4Q9NPJ6 270 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 CHIC2Q9UKJ5 165 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 RPGRIP1LQ68CZ1 1315 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 PAK3O75914 559 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 MAP2K2P36507 400 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 PDCD2Q16342 344 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-203ENST00000357395 VPS36Q86VN1 386 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 MAP3K9P80192 1104 aa5.45□□□□□ -1.54
SYNE2-203ENST00000357395 PPFIA2O75334 1257 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PTPN14Q15678 1187 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PDCD7Q8N8D1 485 aaKnown RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 HSP90AA5PQ58FG0 334 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 UIMC1Q96RL1 719 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 TSGA10Q9BZW7 698 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 GFAPP14136 432 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 DEUP1Q05D60 604 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PPP2R5EQ16537 467 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PPP1R9BQ96SB3 815 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 FRAT2O75474 233 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 CEP131Q9UPN4 1083 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 ODF2Q5BJF6 829 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 SYNE3Q6ZMZ3 975 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PPFIBP1Q86W92 1011 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 BCAP29Q9UHQ4 241 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PEX19P40855 299 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 FAN1Q9Y2M0 1017 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 DZIP1Q86YF9 867 aaKnown RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 CACNA2D3Q8IZS8 1091 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 ZNF853P0CG23 659 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 APBA1Q02410 837 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 WHAMMP3Q1A5X7 153 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 BAG4O95429 457 aaKnown RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PPFIA1Q13136 1202 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 TPX2Q9ULW0 747 aaKnown RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 PHLDB2Q86SQ0 1253 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 ANKRD27Q96NW4 1050 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 FAM210AQ96ND0 272 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 EPB41L2O43491 1005 aaKnown RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 ATP11AP98196 1134 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 SEPT2Q15019 361 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 CCHCR1Q8TD31 782 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 MAP2K1Q02750 393 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 SEPT7Q16181 437 aaKnown RBP5.44□□□□□ -1.54
SYNE2-203ENST00000357395 EVI5O60447 810 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 GBP1P32455 592 aa5.44□□□□□ -1.54
SYNE2-203ENST00000357395 MSH5O43196 834 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 EPS15P42566 896 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 LACTBP83111 547 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 NAA25Q14CX7 972 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 RNF8O76064 485 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 ALDH3A1P30838 453 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 KLHL40Q2TBA0 621 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 ZNF280CQ8ND82 737 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 MAML3Q96JK9 1138 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 MOV10L1Q9BXT6 1211 aaKnown RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 DDX19AQ9NUU7 478 aaKnown RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 TEX2Q8IWB9 1127 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 YY1AP1Q9H869 796 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 LRRC45Q96CN5 670 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 IQSEC3Q9UPP2 1182 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 K7ELQ4 463 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 HOXC8P31273 242 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 SART3Q15020 963 aaKnown RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 STMN1P16949 149 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 CACNA2D4Q7Z3S7 1137 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 ESF1Q9H501 851 aaKnown RBP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 RRP7BPQ9NSQ0 103 aa5.43□□□□□ -1.54
SYNE2-203ENST00000357395 ZRANB2O95218 330 aaKnown RBP eCLIP5.43□□□□□ -1.54
SYNE2-203ENST00000357395 IRX1P78414 480 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms