RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SOGA3Q5TF21 947 aa15.03■□□□□ -0
SMC4-202ENST00000357388 WASF1Q92558 559 aa15.03■□□□□ -0
SMC4-202ENST00000357388 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
SMC4-202ENST00000357388 SPECC1LQ69YQ0 1117 aa15.02■□□□□ -0
SMC4-202ENST00000357388 TXNDC2Q86VQ3 553 aa15.02■□□□□ -0
SMC4-202ENST00000357388 CCDC175P0C221 793 aa15.02■□□□□ -0
SMC4-202ENST00000357388 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
SMC4-202ENST00000357388 THEMISQ8N1K5 641 aaPredicted RBP15.02■□□□□ -0
SMC4-202ENST00000357388 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
SMC4-202ENST00000357388 STRN4Q9NRL3 753 aa15.02■□□□□ -0
SMC4-202ENST00000357388 ANO10Q9NW15 660 aa15.02■□□□□ -0
SMC4-202ENST00000357388 ATP2B1P20020 1258 aa15.02□□□□□ -0.01
SMC4-202ENST00000357388 CEP63Q96MT8 703 aa15.02□□□□□ -0.01
SMC4-202ENST00000357388 CEP131Q9UPN4 1083 aa15.02□□□□□ -0.01
SMC4-202ENST00000357388 GSDMDP57764 484 aa15.02□□□□□ -0.01
SMC4-202ENST00000357388 GPATCH11Q8N954 259 aa15.02□□□□□ -0.01
SMC4-202ENST00000357388 ATP2B2Q01814 1243 aa15.01□□□□□ -0.01
SMC4-202ENST00000357388 IVLP07476 585 aa15.01□□□□□ -0.01
SMC4-202ENST00000357388 EIF5P55010 431 aaKnown RBP15.01□□□□□ -0.01
SMC4-202ENST00000357388 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
SMC4-202ENST00000357388 TRIM21P19474 475 aaKnown RBP15.01□□□□□ -0.01
SMC4-202ENST00000357388 RNF187Q5TA31 235 aaPredicted RBP15.01□□□□□ -0.01
SMC4-202ENST00000357388 CTAGE5O15320 804 aa15.01□□□□□ -0.01
SMC4-202ENST00000357388 NBPF1Q3BBV0 1214 aa15.01□□□□□ -0.01
SMC4-202ENST00000357388 CFAP100Q494V2 611 aa15□□□□□ -0.01
SMC4-202ENST00000357388 CABP4P57796 275 aa15□□□□□ -0.01
SMC4-202ENST00000357388 PRDM10Q9NQV6 1147 aa15□□□□□ -0.01
SMC4-202ENST00000357388 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
SMC4-202ENST00000357388 DNAI2Q9GZS0 605 aa15□□□□□ -0.01
SMC4-202ENST00000357388 MPHOSPH10O00566 681 aaKnown RBP15□□□□□ -0.01
SMC4-202ENST00000357388 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
SMC4-202ENST00000357388 NAA15Q9BXJ9 866 aaKnown RBP15□□□□□ -0.01
SMC4-202ENST00000357388 POTEJP0CG39 1038 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 DNAAF4Q8WXU2 420 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 PDRG1Q9NUG6 133 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 GTF2A1P52655 376 aaPredicted RBP14.99□□□□□ -0.01
SMC4-202ENST00000357388 C6orf163Q5TEZ5 329 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 ANKRD18BA2A2Z9 1011 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 PAFAH1B1P43034 410 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 IFFO1Q0D2I5 559 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 FEZ1Q99689 392 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 CCDC69A6NI79 296 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 URI1O94763 535 aaPredicted RBP14.99□□□□□ -0.01
SMC4-202ENST00000357388 KIF4BQ2VIQ3 1234 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 MPHOSPH8Q99549 860 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
SMC4-202ENST00000357388 RRBP1Q9P2E9 1410 aaKnown RBP14.98□□□□□ -0.01
SMC4-202ENST00000357388 GTF2F1P35269 517 aaKnown RBP eCLIP14.98□□□□□ -0.018e-49■■■■■ 172.1
SMC4-202ENST00000357388 TOM1L2Q6ZVM7 507 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
SMC4-202ENST00000357388 TNNT1P13805 278 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 FYCO1Q9BQS8 1478 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 SYCE3A1L190 88 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
SMC4-202ENST00000357388 TMOD2Q9NZR1 351 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 RBM5P52756 815 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMC4-202ENST00000357388 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 CTR9Q6PD62 1173 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 CTNNA3Q9UI47 895 aa14.98□□□□□ -0.01
SMC4-202ENST00000357388 SCAND2PQ9GZW5 306 aaPredicted RBP14.97□□□□□ -0.01
SMC4-202ENST00000357388 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
SMC4-202ENST00000357388 USO1O60763 962 aaKnown RBP14.97□□□□□ -0.01
SMC4-202ENST00000357388 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
SMC4-202ENST00000357388 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
SMC4-202ENST00000357388 TAOK3Q9H2K8 898 aa14.97□□□□□ -0.01
SMC4-202ENST00000357388 VPS36Q86VN1 386 aa14.96□□□□□ -0.01
SMC4-202ENST00000357388 CHD1LQ86WJ1 897 aa14.96□□□□□ -0.01
SMC4-202ENST00000357388 KRT222Q8N1A0 295 aa14.96□□□□□ -0.01
SMC4-202ENST00000357388 FKBP15Q5T1M5 1219 aa14.96□□□□□ -0.01
SMC4-202ENST00000357388 CAVIN2O95810 425 aa14.96□□□□□ -0.02
SMC4-202ENST00000357388 TOP1P11387 765 aaKnown RBP14.96□□□□□ -0.02
SMC4-202ENST00000357388 MNAT1P51948 309 aa14.96□□□□□ -0.02
SMC4-202ENST00000357388 IPO4Q8TEX9 1081 aaKnown RBP14.96□□□□□ -0.02
SMC4-202ENST00000357388 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
SMC4-202ENST00000357388 CFAP57Q96MR6 1250 aa14.95□□□□□ -0.02
SMC4-202ENST00000357388 CLIP2Q9UDT6 1046 aa14.95□□□□□ -0.02
SMC4-202ENST00000357388 ADAMTS8Q9UP79 889 aa14.95□□□□□ -0.02
SMC4-202ENST00000357388 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
SMC4-202ENST00000357388 GTPBP4Q9BZE4 634 aaKnown RBP14.95□□□□□ -0.02
SMC4-202ENST00000357388 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
SMC4-202ENST00000357388 NEBLO76041 1014 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 FGFR1OPO95684 399 aaKnown RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 MPNDQ8N594 471 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 MVPQ14764 893 aaKnown RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 ZMYND15Q9H091 742 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 SEPT11Q9NVA2 429 aaKnown RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 TUBB4AP04350 444 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 ZSCAN29Q8IWY8 852 aaPredicted RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 DHX37Q8IY37 1157 aaKnown RBP14.94□□□□□ -0.02
SMC4-202ENST00000357388 ZNF428Q96B54 188 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 HSPA4P34932 840 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 DDX12PQ92771 950 aa14.94□□□□□ -0.02
SMC4-202ENST00000357388 CCDC113Q9H0I3 377 aa14.93□□□□□ -0.02
SMC4-202ENST00000357388 ZHX3Q9H4I2 956 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms