RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 FOXO3O43524 673 aa8.27□□□□□ -1.09
RTN4-203ENST00000357376 ZSCAN23Q3MJ62 389 aa8.27□□□□□ -1.09
RTN4-203ENST00000357376 PHF23Q9BUL5 403 aaPredicted RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 TSPY26PQ9H489 355 aa8.27□□□□□ -1.09
RTN4-203ENST00000357376 DCTPP1Q9H773 170 aa8.27□□□□□ -1.09
RTN4-203ENST00000357376 AIMP1Q12904 312 aaKnown RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 EIF4A2Q14240 407 aaKnown RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 CEP85Q6P2H3 762 aa8.27□□□□□ -1.09
RTN4-203ENST00000357376 ABTB2Q8N961 1025 aa8.27□□□□□ -1.09
RTN4-203ENST00000357376 DDX54Q8TDD1 881 aaKnown RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 MCM2P49736 904 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 GAS2L3Q86XJ1 694 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 ATP6V1DQ9Y5K8 247 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 LRRFIP2Q9Y608 721 aaKnown RBP8.26□□□□□ -1.09
RTN4-203ENST00000357376 PPIP5K1Q6PFW1 1433 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 A0A0G2JS52 829 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 GSPT1P15170 499 aaKnown RBP8.26□□□□□ -1.09
RTN4-203ENST00000357376 IL13P35225 146 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
RTN4-203ENST00000357376 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 ZKSCAN1P17029 563 aaPredicted RBP8.26□□□□□ -1.09
RTN4-203ENST00000357376 CCDC39Q9UFE4 941 aa8.26□□□□□ -1.09
RTN4-203ENST00000357376 ZCCHC11Q5TAX3 1644 aaKnown RBP8.26□□□□□ -1.09
RTN4-203ENST00000357376 TPM2P07951 284 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 CNTROBQ8N137 903 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 CHAMP1Q96JM3 812 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 FOSBP53539 338 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 PDE1AP54750 535 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 FLIIQ13045 1269 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 RUFY2Q8WXA3 655 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 TMX3Q96JJ7 454 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 LAMC1P11047 1609 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 MAP3K4Q9Y6R4 1608 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 CHD1O14646 1710 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
RTN4-203ENST00000357376 PKP1Q13835 747 aa8.25□□□□□ -1.09
RTN4-203ENST00000357376 BCL11BQ9C0K0 894 aaPredicted RBP8.25□□□□□ -1.09
RTN4-203ENST00000357376 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
RTN4-203ENST00000357376 PTPRCP08575 1304 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 ACEP12821 1306 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 C1orf141Q5JVX7 400 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 G2E3Q7L622 706 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 CLASRPQ8N2M8 674 aaKnown RBP8.24□□□□□ -1.09
RTN4-203ENST00000357376 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 MSH6P52701 1360 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 FSD2A1L4K1 749 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 CSB-PGBD3P0DP91 1061 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 SIRT2Q8IXJ6 389 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 SPHKAPQ2M3C7 1700 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 ZFYVE9O95405 1425 aa8.24□□□□□ -1.09
RTN4-203ENST00000357376 WDR33Q9C0J8 1336 aaKnown RBP8.24□□□□□ -1.09
RTN4-203ENST00000357376 TET3O43151 1660 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 ZMYM3Q14202 1370 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 UQCRHLA0A096LP55 91 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 RRP9O43818 475 aaKnown RBP8.23□□□□□ -1.09
RTN4-203ENST00000357376 UQCRHP07919 91 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 SPC24Q8NBT2 197 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.23□□□□□ -1.09
RTN4-203ENST00000357376 ABCA6Q8N139 1617 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 DTNBO60941 627 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 ANXA1P04083 346 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 SIL1Q9H173 461 aa8.23□□□□□ -1.09
RTN4-203ENST00000357376 H3BQV1 296 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 G3BP1Q13283 466 aaKnown RBP eCLIP8.22□□□□□ -1.093e-16■□□□□ 9.4
RTN4-203ENST00000357376 NCBP3Q53F19 620 aaKnown RBP8.22□□□□□ -1.09
RTN4-203ENST00000357376 IFFO2Q5TF58 517 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 BICD2Q8TD16 824 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 SPG7Q9UQ90 795 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 RIMS2Q9UQ26 1411 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 GOLGA6L6A8MZA4 724 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 MTHFSDQ2M296 383 aaKnown RBP8.22□□□□□ -1.09
RTN4-203ENST00000357376 SHROOM2Q13796 1616 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 ABCC4O15439 1325 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 TTC21BQ7Z4L5 1316 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 CASTP20810 708 aaKnown RBP8.22□□□□□ -1.09
RTN4-203ENST00000357376 PSME1Q06323 249 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 FERMT3Q86UX7 667 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 JAKMIP1Q96N16 626 aaKnown RBP8.22□□□□□ -1.09
RTN4-203ENST00000357376 KIF1BO60333 1816 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 POGZQ7Z3K3 1410 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 STK3Q13188 491 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 CCDC83Q8IWF9 413 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 FBXW7Q969H0 707 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 RBM33Q96EV2 1170 aaKnown RBP8.22□□□□□ -1.09
RTN4-203ENST00000357376 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 HDAC5Q9UQL6 1122 aa8.22□□□□□ -1.09
RTN4-203ENST00000357376 EFCAB6Q5THR3 1501 aa8.21□□□□□ -1.09
RTN4-203ENST00000357376 FAM184AQ8NB25 1140 aa8.21□□□□□ -1.09
RTN4-203ENST00000357376 FSD1Q9BTV5 496 aa8.21□□□□□ -1.09
RTN4-203ENST00000357376 RBSNQ9H1K0 784 aa8.21□□□□□ -1.09
RTN4-203ENST00000357376 UHRF1BP1LA0JNW5 1464 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms