RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 ANO10Q9NW15 660 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 C10orf67Q8IYJ2 551 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 USO1O60763 962 aaKnown RBP9.37□□□□□ -0.91
HTT-201ENST00000355072 RNF168Q8IYW5 571 aaPredicted RBP9.37□□□□□ -0.91
HTT-201ENST00000355072 NESP48681 1621 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 MAP2K1Q02750 393 aaPredicted RBP9.37□□□□□ -0.91
HTT-201ENST00000355072 EFCAB2Q5VUJ9 269 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
HTT-201ENST00000355072 MAP3K11Q16584 847 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
HTT-201ENST00000355072 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
HTT-201ENST00000355072 ARHGAP25P42331 645 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 RAD50Q92878 1312 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 CKAP4Q07065 602 aaKnown RBP9.36□□□□□ -0.91
HTT-201ENST00000355072 CCDC110Q8TBZ0 833 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 OPA1O60313 960 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 SIN3AQ96ST3 1273 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 SNAPC4Q5SXM2 1469 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 IFT74Q96LB3 600 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 COG3Q96JB2 828 aa9.36□□□□□ -0.91
HTT-201ENST00000355072 NUP62CLQ9H1M0 184 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 HMGXB3Q12766 1538 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 CCDC6Q16204 474 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 UPF3BQ9BZI7 483 aaKnown RBP9.35□□□□□ -0.91
HTT-201ENST00000355072 USP25Q9UHP3 1055 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
HTT-201ENST00000355072 CCDC57Q2TAC2 916 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 PTPN23Q9H3S7 1636 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 BMP15O95972 392 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 ATP5DP30049 168 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 RILPL2Q969X0 211 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
HTT-201ENST00000355072 GTF2A1P52655 376 aaPredicted RBP9.34□□□□□ -0.91
HTT-201ENST00000355072 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 LUC7L3O95232 432 aaKnown RBP9.34□□□□□ -0.91
HTT-201ENST00000355072 CCT4P50991 539 aaKnown RBP9.34□□□□□ -0.91
HTT-201ENST00000355072 SUDS3Q9H7L9 328 aaPredicted RBP9.34□□□□□ -0.91
HTT-201ENST00000355072 INSRP06213 1382 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 CASQ1P31415 396 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 WWC2Q6AWC2 1192 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 ZFYP08048 801 aaPredicted RBP9.34□□□□□ -0.91
HTT-201ENST00000355072 HOMEZQ8IX15 550 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
HTT-201ENST00000355072 ELP1O95163 1332 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 ATL3Q6DD88 541 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 SEPT14Q6ZU15 432 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 RASAL2Q9UJF2 1139 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 MNAT1P51948 309 aa9.34□□□□□ -0.91
HTT-201ENST00000355072 ARMC9Q7Z3E5 817 aa9.34□□□□□ -0.92
HTT-201ENST00000355072 CNPY4Q8N129 248 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 MPHOSPH10O00566 681 aaKnown RBP9.33□□□□□ -0.92
HTT-201ENST00000355072 G3BP1Q13283 466 aaKnown RBP eCLIP9.33□□□□□ -0.924e-6■■■□□ 15.5
HTT-201ENST00000355072 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 TDO2P48775 406 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 RAB34Q9BZG1 259 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 CTNNA3Q9UI47 895 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 ZSCAN25Q6NSZ9 544 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 WDR63Q8IWG1 891 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 IRX4P78413 519 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 PLCD4Q9BRC7 762 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 NOL7Q9UMY1 257 aaKnown RBP9.33□□□□□ -0.92
HTT-201ENST00000355072 ARHGEF12Q9NZN5 1544 aa9.33□□□□□ -0.92
HTT-201ENST00000355072 RASSF2P50749 326 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 STIM2Q9P246 746 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 CLIP2Q9UDT6 1046 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 ARID4AP29374 1257 aaPredicted RBP9.32□□□□□ -0.92
HTT-201ENST00000355072 UBE2HP62256 183 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 DAAM2Q86T65 1068 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 SMARCC1Q92922 1105 aaPredicted RBP9.32□□□□□ -0.92
HTT-201ENST00000355072 NACAP1Q9BZK3 213 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 C1orf141Q5JVX7 400 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 BMP2KQ9NSY1 1161 aaPredicted RBP9.32□□□□□ -0.92
HTT-201ENST00000355072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.32□□□□□ -0.924e-7■■■■■ 330.6
HTT-201ENST00000355072 SPC24Q8NBT2 197 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 TRIM34Q9BYJ4 488 aa9.32□□□□□ -0.92
HTT-201ENST00000355072 L3MBTL2Q969R5 705 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 SEPT11Q9NVA2 429 aaKnown RBP9.31□□□□□ -0.92
HTT-201ENST00000355072 HDAC9Q9UKV0 1011 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 USP37Q86T82 979 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.922e-6■■■□□ 18.2
HTT-201ENST00000355072 TAF4BQ92750 862 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 GTF2F1P35269 517 aaKnown RBP eCLIP9.31□□□□□ -0.921e-7■■■■■ 40.3
HTT-201ENST00000355072 ME1P48163 572 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 VPS53Q5VIR6 699 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 ZSCAN16Q9H4T2 348 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms