RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-205ENST00000350435 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-205ENST00000350435 COL18A1P39060 1754 aa13.64□□□□□ -0.23
UBE2D3-205ENST00000350435 C9orf131Q5VYM1 1079 aa13.64□□□□□ -0.23
UBE2D3-205ENST00000350435 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
UBE2D3-205ENST00000350435 RGL3Q3MIN7 710 aa13.63□□□□□ -0.23
UBE2D3-205ENST00000350435 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
UBE2D3-205ENST00000350435 N4BP2Q86UW6 1770 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-205ENST00000350435 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-205ENST00000350435 CCDC7Q96M83 1385 aa13.6□□□□□ -0.23
UBE2D3-205ENST00000350435 PPIP5K1Q6PFW1 1433 aa13.6□□□□□ -0.23
UBE2D3-205ENST00000350435 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
UBE2D3-205ENST00000350435 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-205ENST00000350435 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
UBE2D3-205ENST00000350435 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-205ENST00000350435 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
UBE2D3-205ENST00000350435 ACEP12821 1306 aa13.59□□□□□ -0.23
UBE2D3-205ENST00000350435 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
UBE2D3-205ENST00000350435 USP54Q70EL1 1684 aa13.58□□□□□ -0.24
UBE2D3-205ENST00000350435 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-205ENST00000350435 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
UBE2D3-205ENST00000350435 KIF13BQ9NQT8 1826 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 ARFGEF1Q9Y6D6 1849 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 WBP1LQ9NX94 342 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 C5P01031 1676 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 CNTNAP1P78357 1384 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
UBE2D3-205ENST00000350435 PRPF38BQ5VTL8 546 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-205ENST00000350435 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-205ENST00000350435 QRICH2Q9H0J4 1663 aa13.55□□□□□ -0.24
UBE2D3-205ENST00000350435 SBF1O95248 1867 aa13.55□□□□□ -0.24
UBE2D3-205ENST00000350435 FCHSD2O94868 740 aa13.54□□□□□ -0.24
UBE2D3-205ENST00000350435 TRAK1Q9UPV9 953 aa13.54□□□□□ -0.24
UBE2D3-205ENST00000350435 SLIT3O75094 1523 aa13.54□□□□□ -0.24
UBE2D3-205ENST00000350435 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-205ENST00000350435 CPSF1Q10570 1443 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-205ENST00000350435 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 ITGAEP38570 1179 aa13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 NLRP6P59044 892 aa13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 TGFB2P61812 414 aa13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
UBE2D3-205ENST00000350435 IL2RBP14784 551 aa13.51□□□□□ -0.25
UBE2D3-205ENST00000350435 A0A0G2JLW4 131 aa13.5□□□□□ -0.25
UBE2D3-205ENST00000350435 VEGFBP49765 207 aa13.5□□□□□ -0.25
UBE2D3-205ENST00000350435 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
UBE2D3-205ENST00000350435 CCDC61Q9Y6R9 512 aa13.49□□□□□ -0.25
UBE2D3-205ENST00000350435 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-205ENST00000350435 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 USP47Q96K76 1375 aa13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 MAP2K1Q02750 393 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 ARHGEF25Q86VW2 580 aa13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-205ENST00000350435 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
UBE2D3-205ENST00000350435 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
UBE2D3-205ENST00000350435 AK7Q96M32 723 aa13.45□□□□□ -0.26
UBE2D3-205ENST00000350435 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
UBE2D3-205ENST00000350435 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
UBE2D3-205ENST00000350435 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 ERBB3P21860 1342 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 PHF14O94880 888 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 DPEP1P16444 411 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 KCNH5Q8NCM2 988 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 NSD2O96028 1365 aa13.44□□□□□ -0.26
UBE2D3-205ENST00000350435 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
UBE2D3-205ENST00000350435 MCOLN1Q9GZU1 580 aa13.43□□□□□ -0.26
UBE2D3-205ENST00000350435 BEGAINQ9BUH8 593 aa13.42□□□□□ -0.26
UBE2D3-205ENST00000350435 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
UBE2D3-205ENST00000350435 TIAM2Q8IVF5 1701 aa13.42□□□□□ -0.26
UBE2D3-205ENST00000350435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-205ENST00000350435 SOX12O15370 315 aa13.41□□□□□ -0.26
UBE2D3-205ENST00000350435 MMP10P09238 476 aa13.41□□□□□ -0.26
UBE2D3-205ENST00000350435 DCAF5Q96JK2 942 aa13.41□□□□□ -0.26
UBE2D3-205ENST00000350435 DLL1O00548 723 aa13.4□□□□□ -0.26
UBE2D3-205ENST00000350435 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
UBE2D3-205ENST00000350435 TMEM88BA6NKF7 163 aa13.39□□□□□ -0.27
UBE2D3-205ENST00000350435 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-205ENST00000350435 SSFA2P28290 1259 aa13.38□□□□□ -0.27
UBE2D3-205ENST00000350435 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
UBE2D3-205ENST00000350435 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
UBE2D3-205ENST00000350435 CASP8AP2Q9UKL3 1982 aa13.38□□□□□ -0.27
UBE2D3-205ENST00000350435 POTECB2RU33 542 aa13.37□□□□□ -0.27
UBE2D3-205ENST00000350435 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
UBE2D3-205ENST00000350435 WDR33Q9C0J8 1336 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-205ENST00000350435 LMNB1P20700 586 aa13.35□□□□□ -0.27
UBE2D3-205ENST00000350435 KCNA3P22001 575 aa13.35□□□□□ -0.27
UBE2D3-205ENST00000350435 SOX10P56693 466 aa13.35□□□□□ -0.27
UBE2D3-205ENST00000350435 DGKZQ13574 1117 aa13.35□□□□□ -0.27
UBE2D3-205ENST00000350435 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms