RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 RGS12O14924 1447 aa17.01■□□□□ 0.31
ERGIC3-202ENST00000348547 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
ERGIC3-202ENST00000348547 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
ERGIC3-202ENST00000348547 TNS2Q63HR2 1409 aa17■□□□□ 0.31
ERGIC3-202ENST00000348547 ONECUT3O60422 494 aaPredicted RBP17■□□□□ 0.31
ERGIC3-202ENST00000348547 ZNF772Q68DY9 489 aaPredicted RBP17■□□□□ 0.31
ERGIC3-202ENST00000348547 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
ERGIC3-202ENST00000348547 NUDCQ9Y266 331 aa17■□□□□ 0.31
ERGIC3-202ENST00000348547 FCHSD2O94868 740 aa16.99■□□□□ 0.31
ERGIC3-202ENST00000348547 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
ERGIC3-202ENST00000348547 IL2RBP14784 551 aa16.98■□□□□ 0.31
ERGIC3-202ENST00000348547 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
ERGIC3-202ENST00000348547 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
ERGIC3-202ENST00000348547 CYP27B1O15528 508 aa16.96■□□□□ 0.31
ERGIC3-202ENST00000348547 RBM6P78332 1123 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-202ENST00000348547 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-202ENST00000348547 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
ERGIC3-202ENST00000348547 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.3
ERGIC3-202ENST00000348547 SBF2Q86WG5 1849 aa16.95■□□□□ 0.3
ERGIC3-202ENST00000348547 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-202ENST00000348547 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
ERGIC3-202ENST00000348547 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-202ENST00000348547 PLEKHG2Q9H7P9 1386 aa16.95■□□□□ 0.3
ERGIC3-202ENST00000348547 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-202ENST00000348547 SEPT12Q8IYM1 358 aa16.93■□□□□ 0.3
ERGIC3-202ENST00000348547 MARCH10Q8NA82 808 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-202ENST00000348547 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
ERGIC3-202ENST00000348547 ITGB4P16144 1822 aa16.93■□□□□ 0.3
ERGIC3-202ENST00000348547 RUNDC1Q96C34 613 aa16.92■□□□□ 0.3
ERGIC3-202ENST00000348547 APAF1O14727 1248 aa16.91■□□□□ 0.3
ERGIC3-202ENST00000348547 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
ERGIC3-202ENST00000348547 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
ERGIC3-202ENST00000348547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.3
ERGIC3-202ENST00000348547 RXRBP28702 533 aa16.9■□□□□ 0.3
ERGIC3-202ENST00000348547 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
ERGIC3-202ENST00000348547 PHKG2P15735 406 aa16.89■□□□□ 0.3
ERGIC3-202ENST00000348547 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.3
ERGIC3-202ENST00000348547 NFE2L2Q16236 605 aa16.89■□□□□ 0.3
ERGIC3-202ENST00000348547 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.3
ERGIC3-202ENST00000348547 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.3
ERGIC3-202ENST00000348547 MRC1P22897 1456 aa16.89■□□□□ 0.29
ERGIC3-202ENST00000348547 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
ERGIC3-202ENST00000348547 DDB1Q16531 1140 aa16.89■□□□□ 0.29
ERGIC3-202ENST00000348547 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
ERGIC3-202ENST00000348547 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
ERGIC3-202ENST00000348547 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
ERGIC3-202ENST00000348547 PCDH11XQ9BZA7 1347 aa16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 PCDH11YQ9BZA8 1340 aa16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 PTF1AQ7RTS3 328 aa16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
ERGIC3-202ENST00000348547 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
ERGIC3-202ENST00000348547 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
ERGIC3-202ENST00000348547 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
ERGIC3-202ENST00000348547 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
ERGIC3-202ENST00000348547 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
ERGIC3-202ENST00000348547 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 A0A0G2JS52 829 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 EXOC5O00471 708 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 MYT1Q01538 1121 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 NEUROD2Q15784 382 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
ERGIC3-202ENST00000348547 BTAF1O14981 1849 aa16.84■□□□□ 0.29
ERGIC3-202ENST00000348547 MCM10Q7L590 875 aa16.84■□□□□ 0.29
ERGIC3-202ENST00000348547 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
ERGIC3-202ENST00000348547 KDM3BQ7LBC6 1761 aa16.84■□□□□ 0.29
ERGIC3-202ENST00000348547 BCL9O00512 1426 aa16.83■□□□□ 0.29
ERGIC3-202ENST00000348547 KAT6BQ8WYB5 2073 aa16.83■□□□□ 0.28
ERGIC3-202ENST00000348547 RIPK4P57078 832 aa16.83■□□□□ 0.28
ERGIC3-202ENST00000348547 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
ERGIC3-202ENST00000348547 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
ERGIC3-202ENST00000348547 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
ERGIC3-202ENST00000348547 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-202ENST00000348547 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
ERGIC3-202ENST00000348547 KRT27Q7Z3Y8 459 aa16.81■□□□□ 0.28
ERGIC3-202ENST00000348547 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
ERGIC3-202ENST00000348547 KCNQ2O43526 872 aa16.8■□□□□ 0.28
ERGIC3-202ENST00000348547 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
ERGIC3-202ENST00000348547 C1orf141Q5JVX7 400 aa16.79■□□□□ 0.28
ERGIC3-202ENST00000348547 WWC1Q8IX03 1113 aa16.79■□□□□ 0.28
ERGIC3-202ENST00000348547 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
ERGIC3-202ENST00000348547 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
ERGIC3-202ENST00000348547 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
ERGIC3-202ENST00000348547 ILDR2Q71H61 639 aa16.78■□□□□ 0.28
ERGIC3-202ENST00000348547 DCAF5Q96JK2 942 aa16.78■□□□□ 0.28
ERGIC3-202ENST00000348547 CCDC27Q2M243 656 aa16.77■□□□□ 0.28
ERGIC3-202ENST00000348547 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
ERGIC3-202ENST00000348547 KCPQ6ZWJ8 1503 aa16.77■□□□□ 0.27
ERGIC3-202ENST00000348547 C5P01031 1676 aa16.76■□□□□ 0.27
ERGIC3-202ENST00000348547 LY75O60449 1722 aa16.76■□□□□ 0.27
ERGIC3-202ENST00000348547 HTATSF1O43719 755 aaKnown RBP16.76■□□□□ 0.27
ERGIC3-202ENST00000348547 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
ERGIC3-202ENST00000348547 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
ERGIC3-202ENST00000348547 PIGBQ92521 554 aa16.75■□□□□ 0.27
ERGIC3-202ENST00000348547 YTHDC1Q96MU7 727 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-202ENST00000348547 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms