RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 ERBB3P21860 1342 aa11.65□□□□□ -0.54
NLRC4-201ENST00000342905 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
NLRC4-201ENST00000342905 KIF24Q5T7B8 1368 aa11.65□□□□□ -0.54
NLRC4-201ENST00000342905 IP6K1Q92551 441 aa11.65□□□□□ -0.55
NLRC4-201ENST00000342905 CARD10Q9BWT7 1032 aa11.65□□□□□ -0.55
NLRC4-201ENST00000342905 BRWD3Q6RI45 1802 aa11.64□□□□□ -0.55
NLRC4-201ENST00000342905 AMPHP49418 695 aa11.64□□□□□ -0.55
NLRC4-201ENST00000342905 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
NLRC4-201ENST00000342905 HOXC9P31274 260 aa11.63□□□□□ -0.55
NLRC4-201ENST00000342905 MTHFSP49914 203 aa11.63□□□□□ -0.55
NLRC4-201ENST00000342905 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
NLRC4-201ENST00000342905 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
NLRC4-201ENST00000342905 FBLN1P23142 703 aa11.62□□□□□ -0.55
NLRC4-201ENST00000342905 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
NLRC4-201ENST00000342905 FAM208AQ9UK61 1670 aaKnown RBP11.62□□□□□ -0.55
NLRC4-201ENST00000342905 PARP4Q9UKK3 1724 aaKnown RBP11.62□□□□□ -0.55
NLRC4-201ENST00000342905 FLT4P35916 1363 aa11.62□□□□□ -0.55
NLRC4-201ENST00000342905 EVX2Q03828 476 aa11.61□□□□□ -0.55
NLRC4-201ENST00000342905 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
NLRC4-201ENST00000342905 DISP2A7MBM2 1401 aa11.61□□□□□ -0.55
NLRC4-201ENST00000342905 WNK3Q9BYP7 1800 aa11.6□□□□□ -0.55
NLRC4-201ENST00000342905 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
NLRC4-201ENST00000342905 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
NLRC4-201ENST00000342905 INSRP06213 1382 aa11.6□□□□□ -0.55
NLRC4-201ENST00000342905 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
NLRC4-201ENST00000342905 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
NLRC4-201ENST00000342905 DDB1Q16531 1140 aa11.59□□□□□ -0.55
NLRC4-201ENST00000342905 CFAP53Q96M91 514 aa11.59□□□□□ -0.55
NLRC4-201ENST00000342905 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
NLRC4-201ENST00000342905 WDR43Q15061 677 aaKnown RBP eCLIP11.58□□□□□ -0.56
NLRC4-201ENST00000342905 FAM196AQ6ZSG2 479 aa11.58□□□□□ -0.56
NLRC4-201ENST00000342905 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
NLRC4-201ENST00000342905 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
NLRC4-201ENST00000342905 TNS2Q63HR2 1409 aa11.57□□□□□ -0.56
NLRC4-201ENST00000342905 IL2RBP14784 551 aa11.57□□□□□ -0.56
NLRC4-201ENST00000342905 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
NLRC4-201ENST00000342905 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
NLRC4-201ENST00000342905 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
NLRC4-201ENST00000342905 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
NLRC4-201ENST00000342905 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
NLRC4-201ENST00000342905 EXOC5O00471 708 aa11.55□□□□□ -0.56
NLRC4-201ENST00000342905 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
NLRC4-201ENST00000342905 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
NLRC4-201ENST00000342905 BCL9O00512 1426 aa11.55□□□□□ -0.56
NLRC4-201ENST00000342905 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
NLRC4-201ENST00000342905 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
NLRC4-201ENST00000342905 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
NLRC4-201ENST00000342905 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
NLRC4-201ENST00000342905 BAG6P46379 1132 aa11.53□□□□□ -0.56
NLRC4-201ENST00000342905 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
NLRC4-201ENST00000342905 LHX8Q68G74 356 aa11.53□□□□□ -0.56
NLRC4-201ENST00000342905 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
NLRC4-201ENST00000342905 MARCH10Q8NA82 808 aaPredicted RBP11.53□□□□□ -0.56
NLRC4-201ENST00000342905 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
NLRC4-201ENST00000342905 NCAPD2Q15021 1401 aa11.52□□□□□ -0.56
NLRC4-201ENST00000342905 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
NLRC4-201ENST00000342905 TRIM37O94972 964 aa11.52□□□□□ -0.57
NLRC4-201ENST00000342905 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
NLRC4-201ENST00000342905 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
NLRC4-201ENST00000342905 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
NLRC4-201ENST00000342905 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
NLRC4-201ENST00000342905 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
NLRC4-201ENST00000342905 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
NLRC4-201ENST00000342905 MEGF6O75095 1541 aa11.51□□□□□ -0.57
NLRC4-201ENST00000342905 U2SURPO15042 1029 aaKnown RBP11.51□□□□□ -0.57
NLRC4-201ENST00000342905 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
NLRC4-201ENST00000342905 IL13P35225 146 aa11.51□□□□□ -0.57
NLRC4-201ENST00000342905 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.57
NLRC4-201ENST00000342905 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
NLRC4-201ENST00000342905 DEFB132Q7Z7B7 95 aa11.5□□□□□ -0.57
NLRC4-201ENST00000342905 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
NLRC4-201ENST00000342905 PLEKHG2Q9H7P9 1386 aa11.5□□□□□ -0.57
NLRC4-201ENST00000342905 TATP17735 454 aaPredicted RBP11.49□□□□□ -0.57
NLRC4-201ENST00000342905 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
NLRC4-201ENST00000342905 APBA3O96018 575 aa11.48□□□□□ -0.57
NLRC4-201ENST00000342905 ZCRB1Q8TBF4 217 aaKnown RBP11.48□□□□□ -0.57
NLRC4-201ENST00000342905 RUNDC1Q96C34 613 aa11.48□□□□□ -0.57
NLRC4-201ENST00000342905 EYA1Q99502 592 aa11.48□□□□□ -0.57
NLRC4-201ENST00000342905 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
NLRC4-201ENST00000342905 IGSF1Q8N6C5 1336 aa11.47□□□□□ -0.57
NLRC4-201ENST00000342905 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
NLRC4-201ENST00000342905 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
NLRC4-201ENST00000342905 SBF2Q86WG5 1849 aa11.47□□□□□ -0.57
NLRC4-201ENST00000342905 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
NLRC4-201ENST00000342905 PCDH11XQ9BZA7 1347 aa11.47□□□□□ -0.57
NLRC4-201ENST00000342905 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
NLRC4-201ENST00000342905 APAF1O14727 1248 aa11.46□□□□□ -0.57
NLRC4-201ENST00000342905 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
NLRC4-201ENST00000342905 DDX54Q8TDD1 881 aaKnown RBP11.46□□□□□ -0.57
NLRC4-201ENST00000342905 PLEKHF1Q96S99 279 aa11.46□□□□□ -0.57
NLRC4-201ENST00000342905 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
NLRC4-201ENST00000342905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
NLRC4-201ENST00000342905 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.57
NLRC4-201ENST00000342905 RGPD3A6NKT7 1758 aaPredicted RBP11.46□□□□□ -0.58
NLRC4-201ENST00000342905 RGPD4Q7Z3J3 1758 aa11.46□□□□□ -0.58
NLRC4-201ENST00000342905 NHSQ6T4R5 1651 aa11.46□□□□□ -0.58
NLRC4-201ENST00000342905 HMOX1P09601 288 aa11.45□□□□□ -0.58
NLRC4-201ENST00000342905 CAMKK2Q96RR4 588 aa11.45□□□□□ -0.58
NLRC4-201ENST00000342905 SCN11AQ9UI33 1791 aa11.45□□□□□ -0.58
NLRC4-201ENST00000342905 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms