RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SHANK3Q9BYB0 1731 aa17.73■□□□□ 0.43
TUBD1-202ENST00000340993 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
TUBD1-202ENST00000340993 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
TUBD1-202ENST00000340993 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
TUBD1-202ENST00000340993 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
TUBD1-202ENST00000340993 CDCA7Q9BWT1 371 aaPredicted RBP17.71■□□□□ 0.43
TUBD1-202ENST00000340993 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
TUBD1-202ENST00000340993 ZCRB1Q8TBF4 217 aaKnown RBP17.71■□□□□ 0.43
TUBD1-202ENST00000340993 TRIM37O94972 964 aa17.69■□□□□ 0.42
TUBD1-202ENST00000340993 CCDC184Q52MB2 194 aa17.69■□□□□ 0.42
TUBD1-202ENST00000340993 PTF1AQ7RTS3 328 aa17.68■□□□□ 0.42
TUBD1-202ENST00000340993 NCAPD2Q15021 1401 aa17.67■□□□□ 0.42
TUBD1-202ENST00000340993 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
TUBD1-202ENST00000340993 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
TUBD1-202ENST00000340993 SBF2Q86WG5 1849 aa17.66■□□□□ 0.42
TUBD1-202ENST00000340993 SOCS7O14512 581 aa17.66■□□□□ 0.42
TUBD1-202ENST00000340993 UPF1Q92900 1129 aaKnown RBP eCLIP17.66■□□□□ 0.42
TUBD1-202ENST00000340993 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
TUBD1-202ENST00000340993 DOT1LQ8TEK3 1739 aa17.65■□□□□ 0.42
TUBD1-202ENST00000340993 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
TUBD1-202ENST00000340993 CYP27B1O15528 508 aa17.65■□□□□ 0.42
TUBD1-202ENST00000340993 PRKAR2BP31323 418 aa17.65■□□□□ 0.42
TUBD1-202ENST00000340993 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
TUBD1-202ENST00000340993 KCNQ2O43526 872 aa17.64■□□□□ 0.41
TUBD1-202ENST00000340993 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
TUBD1-202ENST00000340993 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
TUBD1-202ENST00000340993 PCDH11XQ9BZA7 1347 aa17.64■□□□□ 0.41
TUBD1-202ENST00000340993 PCDH11YQ9BZA8 1340 aa17.64■□□□□ 0.41
TUBD1-202ENST00000340993 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
TUBD1-202ENST00000340993 KDRP35968 1356 aa17.63■□□□□ 0.41
TUBD1-202ENST00000340993 DEFB132Q7Z7B7 95 aa17.63■□□□□ 0.41
TUBD1-202ENST00000340993 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
TUBD1-202ENST00000340993 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
TUBD1-202ENST00000340993 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
TUBD1-202ENST00000340993 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
TUBD1-202ENST00000340993 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
TUBD1-202ENST00000340993 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
TUBD1-202ENST00000340993 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
TUBD1-202ENST00000340993 MRS2Q9HD23 443 aa17.61■□□□□ 0.41
TUBD1-202ENST00000340993 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
TUBD1-202ENST00000340993 VIRMAQ69YN4 1812 aaKnown RBP17.6■□□□□ 0.41
TUBD1-202ENST00000340993 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
TUBD1-202ENST00000340993 APBA3O96018 575 aa17.59■□□□□ 0.41
TUBD1-202ENST00000340993 PHKG2P15735 406 aa17.59■□□□□ 0.41
TUBD1-202ENST00000340993 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
TUBD1-202ENST00000340993 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
TUBD1-202ENST00000340993 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
TUBD1-202ENST00000340993 BTAF1O14981 1849 aa17.58■□□□□ 0.4
TUBD1-202ENST00000340993 ITGB4P16144 1822 aa17.58■□□□□ 0.4
TUBD1-202ENST00000340993 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
TUBD1-202ENST00000340993 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
TUBD1-202ENST00000340993 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
TUBD1-202ENST00000340993 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
TUBD1-202ENST00000340993 ADAMTS8Q9UP79 889 aa17.56■□□□□ 0.4
TUBD1-202ENST00000340993 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
TUBD1-202ENST00000340993 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
TUBD1-202ENST00000340993 FCHSD2O94868 740 aa17.54■□□□□ 0.4
TUBD1-202ENST00000340993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.47e-6■■□□□ 12.8
TUBD1-202ENST00000340993 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
TUBD1-202ENST00000340993 NEFMP07197 916 aa17.53■□□□□ 0.4
TUBD1-202ENST00000340993 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
TUBD1-202ENST00000340993 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
TUBD1-202ENST00000340993 LGR6Q9HBX8 967 aa17.53■□□□□ 0.4
TUBD1-202ENST00000340993 KDM6AO15550 1401 aaPredicted RBP17.53■□□□□ 0.4
TUBD1-202ENST00000340993 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
TUBD1-202ENST00000340993 MIER1Q8N108 512 aa17.53■□□□□ 0.4
TUBD1-202ENST00000340993 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
TUBD1-202ENST00000340993 BAG6P46379 1132 aa17.52■□□□□ 0.4
TUBD1-202ENST00000340993 KCNQ4P56696 695 aa17.52■□□□□ 0.4
TUBD1-202ENST00000340993 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
TUBD1-202ENST00000340993 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
TUBD1-202ENST00000340993 SCN11AQ9UI33 1791 aa17.52■□□□□ 0.39
TUBD1-202ENST00000340993 PLEKHF1Q96S99 279 aa17.51■□□□□ 0.39
TUBD1-202ENST00000340993 MCM10Q7L590 875 aa17.51■□□□□ 0.39
TUBD1-202ENST00000340993 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
TUBD1-202ENST00000340993 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
TUBD1-202ENST00000340993 PIGBQ92521 554 aa17.5■□□□□ 0.39
TUBD1-202ENST00000340993 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
TUBD1-202ENST00000340993 CABP4P57796 275 aa17.49■□□□□ 0.39
TUBD1-202ENST00000340993 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
TUBD1-202ENST00000340993 DCAF5Q96JK2 942 aa17.49■□□□□ 0.39
TUBD1-202ENST00000340993 BCL9O00512 1426 aa17.49■□□□□ 0.39
TUBD1-202ENST00000340993 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
TUBD1-202ENST00000340993 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
TUBD1-202ENST00000340993 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
TUBD1-202ENST00000340993 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
TUBD1-202ENST00000340993 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
TUBD1-202ENST00000340993 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
TUBD1-202ENST00000340993 PNISRQ8TF01 805 aaKnown RBP17.47■□□□□ 0.39
TUBD1-202ENST00000340993 SALL2Q9Y467 1007 aaPredicted RBP17.47■□□□□ 0.39
TUBD1-202ENST00000340993 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
TUBD1-202ENST00000340993 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
TUBD1-202ENST00000340993 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
TUBD1-202ENST00000340993 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
TUBD1-202ENST00000340993 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
TUBD1-202ENST00000340993 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
TUBD1-202ENST00000340993 RIPK4P57078 832 aa17.45■□□□□ 0.38
TUBD1-202ENST00000340993 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
TUBD1-202ENST00000340993 CAMKK2Q96RR4 588 aa17.45■□□□□ 0.38
TUBD1-202ENST00000340993 APAF1O14727 1248 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms