RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 KRT27Q7Z3Y8 459 aa34.75■■■■□ 3.15
SMDT1-201ENST00000331479 TNS2Q63HR2 1409 aa34.75■■■■□ 3.15
SMDT1-201ENST00000331479 EP400Q96L91 3159 aa34.74■■■■□ 3.15
SMDT1-201ENST00000331479 U2AF1L5P0DN76 240 aaPredicted RBP34.73■■■■□ 3.15
SMDT1-201ENST00000331479 U2AF1Q01081 240 aaKnown RBP eCLIP34.73■■■■□ 3.15
SMDT1-201ENST00000331479 PDE3BQ13370 1112 aa34.73■■■■□ 3.15
SMDT1-201ENST00000331479 FAM182BQ5T319 152 aa34.72■■■■□ 3.15
SMDT1-201ENST00000331479 ZCRB1Q8TBF4 217 aaKnown RBP34.7■■■■□ 3.15
SMDT1-201ENST00000331479 SHANK3Q9BYB0 1731 aa34.69■■■■□ 3.14
SMDT1-201ENST00000331479 MARCH10Q8NA82 808 aaPredicted RBP34.69■■■■□ 3.14
SMDT1-201ENST00000331479 PKD1L3Q7Z443 1732 aa34.67■■■■□ 3.14
SMDT1-201ENST00000331479 RSPH6AQ9H0K4 717 aa34.66■■■■□ 3.14
SMDT1-201ENST00000331479 DDX54Q8TDD1 881 aaKnown RBP34.66■■■■□ 3.14
SMDT1-201ENST00000331479 MRS2Q9HD23 443 aa34.62■■■■□ 3.13
SMDT1-201ENST00000331479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.62■■■■□ 3.13
SMDT1-201ENST00000331479 FCHSD2O94868 740 aa34.62■■■■□ 3.13
SMDT1-201ENST00000331479 PRKAR2BP31323 418 aa34.62■■■■□ 3.13
SMDT1-201ENST00000331479 SPG7Q9UQ90 795 aa34.62■■■■□ 3.13
SMDT1-201ENST00000331479 PLEKHG2Q9H7P9 1386 aa34.61■■■■□ 3.13
SMDT1-201ENST00000331479 CYP27B1O15528 508 aa34.61■■■■□ 3.13
SMDT1-201ENST00000331479 PLEKHO1Q53GL0 409 aaPredicted RBP34.6■■■■□ 3.13
SMDT1-201ENST00000331479 PCDH11XQ9BZA7 1347 aa34.59■■■■□ 3.13
SMDT1-201ENST00000331479 PCDH11YQ9BZA8 1340 aa34.59■■■■□ 3.13
SMDT1-201ENST00000331479 WDR43Q15061 677 aaKnown RBP eCLIP34.58■■■■□ 3.13
SMDT1-201ENST00000331479 AMOTQ4VCS5 1084 aa34.57■■■■□ 3.13
SMDT1-201ENST00000331479 PHACTR3Q96KR7 559 aa34.57■■■■□ 3.13
SMDT1-201ENST00000331479 MIER1Q8N108 512 aa34.57■■■■□ 3.12
SMDT1-201ENST00000331479 ADAMTS8Q9UP79 889 aa34.57■■■■□ 3.12
SMDT1-201ENST00000331479 FAM196AQ6ZSG2 479 aa34.55■■■■□ 3.12
SMDT1-201ENST00000331479 MTHFSDQ2M296 383 aaKnown RBP34.54■■■■□ 3.12
SMDT1-201ENST00000331479 PLEKHF1Q96S99 279 aa34.54■■■■□ 3.12
SMDT1-201ENST00000331479 ZNF530Q6P9A1 599 aaPredicted RBP34.53■■■■□ 3.12
SMDT1-201ENST00000331479 PNISRQ8TF01 805 aaKnown RBP34.53■■■■□ 3.12
SMDT1-201ENST00000331479 PHKG2P15735 406 aa34.53■■■■□ 3.12
SMDT1-201ENST00000331479 IFNL2Q8IZJ0 200 aa34.51■■■■□ 3.12
SMDT1-201ENST00000331479 BCL9O00512 1426 aa34.51■■■■□ 3.11
SMDT1-201ENST00000331479 SBF2Q86WG5 1849 aa34.47■■■■□ 3.11
SMDT1-201ENST00000331479 NKX1-1Q15270 411 aaPredicted RBP34.47■■■■□ 3.11
SMDT1-201ENST00000331479 CCDC146Q8IYE0 955 aa34.47■■■■□ 3.11
SMDT1-201ENST00000331479 CCER2I3L3R5 266 aa34.46■■■■□ 3.11
SMDT1-201ENST00000331479 ACSBG1Q96GR2 724 aa34.46■■■■□ 3.11
SMDT1-201ENST00000331479 PNNQ9H307 717 aaKnown RBP34.46■■■■□ 3.11
SMDT1-201ENST00000331479 C1orf141Q5JVX7 400 aa34.45■■■■□ 3.11
SMDT1-201ENST00000331479 TRIM37O94972 964 aa34.44■■■■□ 3.1
SMDT1-201ENST00000331479 AKAP4Q5JQC9 854 aa34.44■■■■□ 3.1
SMDT1-201ENST00000331479 PTF1AQ7RTS3 328 aa34.44■■■■□ 3.1
SMDT1-201ENST00000331479 GAS2L2Q8NHY3 880 aa34.44■■■■□ 3.1
SMDT1-201ENST00000331479 DOT1LQ8TEK3 1739 aa34.43■■■■□ 3.1
SMDT1-201ENST00000331479 TOGARAM1Q9Y4F4 1720 aa34.42■■■■□ 3.1
SMDT1-201ENST00000331479 KCNQ2O43526 872 aa34.42■■■■□ 3.1
SMDT1-201ENST00000331479 UPF1Q92900 1129 aaKnown RBP eCLIP34.41■■■■□ 3.1
SMDT1-201ENST00000331479 MAPK8IP3Q9UPT6 1336 aa34.41■■■■□ 3.1
SMDT1-201ENST00000331479 NEFMP07197 916 aa34.4■■■■□ 3.1
SMDT1-201ENST00000331479 KDM6AO15550 1401 aaPredicted RBP34.4■■■■□ 3.1
SMDT1-201ENST00000331479 MPRIPQ6WCQ1 1025 aa34.4■■■■□ 3.1
SMDT1-201ENST00000331479 RUNDC1Q96C34 613 aa34.39■■■■□ 3.1
SMDT1-201ENST00000331479 KAT6BQ8WYB5 2073 aa34.39■■■■□ 3.1
SMDT1-201ENST00000331479 HSP90AB1P08238 724 aaKnown RBP34.38■■■■□ 3.09
SMDT1-201ENST00000331479 PRIM1P49642 420 aaKnown RBP34.38■■■■□ 3.09
SMDT1-201ENST00000331479 FAM9BQ8IZU0 186 aa34.38■■■■□ 3.09
SMDT1-201ENST00000331479 DCAF5Q96JK2 942 aa34.38■■■■□ 3.09
SMDT1-201ENST00000331479 NHSQ6T4R5 1651 aa34.38■■■■□ 3.09
SMDT1-201ENST00000331479 MAP3K5Q99683 1374 aa34.36■■■■□ 3.09
SMDT1-201ENST00000331479 SYTL4Q96C24 671 aaPredicted RBP34.36■■■■□ 3.09
SMDT1-201ENST00000331479 BCL11BQ9C0K0 894 aaPredicted RBP34.36■■■■□ 3.09
SMDT1-201ENST00000331479 LGR6Q9HBX8 967 aa34.36■■■■□ 3.09
SMDT1-201ENST00000331479 TNS1Q9HBL0 1735 aaKnown RBP34.35■■■■□ 3.09
SMDT1-201ENST00000331479 GNAT3A8MTJ3 354 aa34.35■■■■□ 3.09
SMDT1-201ENST00000331479 NFE2L2Q16236 605 aa34.35■■■■□ 3.09
SMDT1-201ENST00000331479 SCN11AQ9UI33 1791 aa34.33■■■■□ 3.09
SMDT1-201ENST00000331479 DLG5Q8TDM6 1919 aa34.32■■■■□ 3.08
SMDT1-201ENST00000331479 ITGB4P16144 1822 aa34.32■■■■□ 3.08
SMDT1-201ENST00000331479 VIRMAQ69YN4 1812 aaKnown RBP34.31■■■■□ 3.08
SMDT1-201ENST00000331479 ADAMTS7Q9UKP4 1686 aa34.31■■■■□ 3.08
SMDT1-201ENST00000331479 RNMTO43148 476 aaKnown RBP34.31■■■■□ 3.08
SMDT1-201ENST00000331479 IL17REQ8NFR9 667 aa34.31■■■■□ 3.08
SMDT1-201ENST00000331479 RRP7AQ9Y3A4 280 aaKnown RBP34.31■■■■□ 3.08
SMDT1-201ENST00000331479 TMPOP42166 694 aaKnown RBP34.3■■■■□ 3.08
SMDT1-201ENST00000331479 CCDC125Q86Z20 511 aa34.3■■■■□ 3.08
SMDT1-201ENST00000331479 SOCS7O14512 581 aa34.29■■■■□ 3.08
SMDT1-201ENST00000331479 ERVV-2B6SEH9 535 aa34.28■■■■□ 3.08
SMDT1-201ENST00000331479 BTAF1O14981 1849 aa34.28■■■■□ 3.08
SMDT1-201ENST00000331479 APAF1O14727 1248 aa34.28■■■■□ 3.08
SMDT1-201ENST00000331479 APBA3O96018 575 aa34.27■■■■□ 3.08
SMDT1-201ENST00000331479 RIPK4P57078 832 aa34.27■■■■□ 3.08
SMDT1-201ENST00000331479 DCTN1Q14203 1278 aa34.27■■■■□ 3.08
SMDT1-201ENST00000331479 PIGBQ92521 554 aa34.27■■■■□ 3.08
SMDT1-201ENST00000331479 SF3B2Q13435 895 aaKnown RBP34.26■■■■□ 3.07
SMDT1-201ENST00000331479 NEUROD2Q15784 382 aa34.26■■■■□ 3.07
SMDT1-201ENST00000331479 MCM10Q7L590 875 aa34.26■■■■□ 3.07
SMDT1-201ENST00000331479 TMOD3Q9NYL9 352 aa34.25■■■■□ 3.07
SMDT1-201ENST00000331479 SENP3-EIF4A1A0A087X0R7 540 aa34.24■■■■□ 3.07
SMDT1-201ENST00000331479 CABP4P57796 275 aa34.24■■■■□ 3.07
SMDT1-201ENST00000331479 RTF1Q92541 710 aaKnown RBP34.24■■■■□ 3.07
SMDT1-201ENST00000331479 HTATSF1O43719 755 aaKnown RBP34.23■■■■□ 3.07
SMDT1-201ENST00000331479 DEFB132Q7Z7B7 95 aa34.23■■■■□ 3.07
SMDT1-201ENST00000331479 NFATC2IPQ8NCF5 419 aa34.23■■■■□ 3.07
SMDT1-201ENST00000331479 CEMIPQ8WUJ3 1361 aa34.23■■■■□ 3.07
SMDT1-201ENST00000331479 SLC52A2Q9HAB3 445 aa34.22■■■■□ 3.07
SMDT1-201ENST00000331479 MRC1P22897 1456 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms