RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 A0A0G2JS52 829 aa21.46■■□□□ 1.03
LRRC28-202ENST00000331450 TATP17735 454 aaPredicted RBP21.46■■□□□ 1.03
LRRC28-202ENST00000331450 MYT1Q01538 1121 aa21.46■■□□□ 1.03
LRRC28-202ENST00000331450 DDB1Q16531 1140 aa21.46■■□□□ 1.03
LRRC28-202ENST00000331450 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
LRRC28-202ENST00000331450 U2AF1L5P0DN76 240 aaPredicted RBP21.45■■□□□ 1.02
LRRC28-202ENST00000331450 U2AF1Q01081 240 aaKnown RBP eCLIP21.45■■□□□ 1.02
LRRC28-202ENST00000331450 DOT1LQ8TEK3 1739 aa21.44■■□□□ 1.02
LRRC28-202ENST00000331450 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
LRRC28-202ENST00000331450 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
LRRC28-202ENST00000331450 MRS2Q9HD23 443 aa21.43■■□□□ 1.02
LRRC28-202ENST00000331450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.43■■□□□ 1.021e-7■■■□□ 18.9
LRRC28-202ENST00000331450 ADAMTS7Q9UKP4 1686 aa21.43■■□□□ 1.02
LRRC28-202ENST00000331450 EXOC5O00471 708 aa21.42■■□□□ 1.02
LRRC28-202ENST00000331450 FCHSD2O94868 740 aa21.42■■□□□ 1.02
LRRC28-202ENST00000331450 ILDR2Q71H61 639 aa21.42■■□□□ 1.02
LRRC28-202ENST00000331450 KRT27Q7Z3Y8 459 aa21.42■■□□□ 1.02
LRRC28-202ENST00000331450 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
LRRC28-202ENST00000331450 NHSQ6T4R5 1651 aa21.41■■□□□ 1.02
LRRC28-202ENST00000331450 BCL9O00512 1426 aa21.41■■□□□ 1.02
LRRC28-202ENST00000331450 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
LRRC28-202ENST00000331450 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
LRRC28-202ENST00000331450 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
LRRC28-202ENST00000331450 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
LRRC28-202ENST00000331450 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
LRRC28-202ENST00000331450 MARCH10Q8NA82 808 aaPredicted RBP21.4■■□□□ 1.02
LRRC28-202ENST00000331450 TNS1Q9HBL0 1735 aaKnown RBP21.39■■□□□ 1.01
LRRC28-202ENST00000331450 PDE3BQ13370 1112 aa21.39■■□□□ 1.01
LRRC28-202ENST00000331450 MIER1Q8N108 512 aa21.39■■□□□ 1.01
LRRC28-202ENST00000331450 PNISRQ8TF01 805 aaKnown RBP21.39■■□□□ 1.01
LRRC28-202ENST00000331450 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
LRRC28-202ENST00000331450 AMOTQ4VCS5 1084 aa21.38■■□□□ 1.01
LRRC28-202ENST00000331450 PLEKHF1Q96S99 279 aa21.38■■□□□ 1.01
LRRC28-202ENST00000331450 SPG7Q9UQ90 795 aa21.38■■□□□ 1.01
LRRC28-202ENST00000331450 ITGB4P16144 1822 aa21.38■■□□□ 1.01
LRRC28-202ENST00000331450 CYP27B1O15528 508 aa21.37■■□□□ 1.01
LRRC28-202ENST00000331450 ADAMTS8Q9UP79 889 aa21.37■■□□□ 1.01
LRRC28-202ENST00000331450 PLEKHO1Q53GL0 409 aaPredicted RBP21.36■■□□□ 1.01
LRRC28-202ENST00000331450 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
LRRC28-202ENST00000331450 PHACTR3Q96KR7 559 aa21.35■■□□□ 1.01
LRRC28-202ENST00000331450 PHKG2P15735 406 aa21.34■■□□□ 1.01
LRRC28-202ENST00000331450 MTHFSDQ2M296 383 aaKnown RBP21.34■■□□□ 1.01
LRRC28-202ENST00000331450 DDX54Q8TDD1 881 aaKnown RBP21.34■■□□□ 1.01
LRRC28-202ENST00000331450 EP400Q96L91 3159 aa21.34■■□□□ 1.01
LRRC28-202ENST00000331450 ZNF530Q6P9A1 599 aaPredicted RBP21.33■■□□□ 1.01
LRRC28-202ENST00000331450 SIPA1L3O60292 1781 aaPredicted RBP21.33■■□□□ 1
LRRC28-202ENST00000331450 BTAF1O14981 1849 aa21.32■■□□□ 1
LRRC28-202ENST00000331450 KDM6AO15550 1401 aaPredicted RBP21.32■■□□□ 1
LRRC28-202ENST00000331450 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
LRRC28-202ENST00000331450 IFNL2Q8IZJ0 200 aa21.32■■□□□ 1
LRRC28-202ENST00000331450 PNNQ9H307 717 aaKnown RBP21.32■■□□□ 1
LRRC28-202ENST00000331450 FAM196AQ6ZSG2 479 aa21.31■■□□□ 1
LRRC28-202ENST00000331450 MRC1P22897 1456 aa21.31■■□□□ 1
LRRC28-202ENST00000331450 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
LRRC28-202ENST00000331450 MAP3K5Q99683 1374 aa21.29■■□□□ 1
LRRC28-202ENST00000331450 RUNDC1Q96C34 613 aa21.29■■□□□ 1
LRRC28-202ENST00000331450 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
LRRC28-202ENST00000331450 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
LRRC28-202ENST00000331450 AKAP4Q5JQC9 854 aa21.28■■□□□ 1
LRRC28-202ENST00000331450 CCDC146Q8IYE0 955 aa21.28■■□□□ 1
LRRC28-202ENST00000331450 MAPK8IP3Q9UPT6 1336 aa21.28■■□□□ 1
LRRC28-202ENST00000331450 PAPPAQ13219 1627 aa21.27■■□□□ 1
LRRC28-202ENST00000331450 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
LRRC28-202ENST00000331450 NEFMP07197 916 aa21.26■□□□□ 0.99
LRRC28-202ENST00000331450 HSP90AB1P08238 724 aaKnown RBP21.25■□□□□ 0.99
LRRC28-202ENST00000331450 NFE2L2Q16236 605 aa21.25■□□□□ 0.99
LRRC28-202ENST00000331450 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
LRRC28-202ENST00000331450 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
LRRC28-202ENST00000331450 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
LRRC28-202ENST00000331450 LY75O60449 1722 aa21.24■□□□□ 0.99
LRRC28-202ENST00000331450 GNAT3A8MTJ3 354 aa21.23■□□□□ 0.99
LRRC28-202ENST00000331450 CEMIPQ8WUJ3 1361 aa21.23■□□□□ 0.99
LRRC28-202ENST00000331450 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
LRRC28-202ENST00000331450 MPRIPQ6WCQ1 1025 aa21.22■□□□□ 0.99
LRRC28-202ENST00000331450 PTF1AQ7RTS3 328 aa21.21■□□□□ 0.99
LRRC28-202ENST00000331450 ACSBG1Q96GR2 724 aa21.21■□□□□ 0.99
LRRC28-202ENST00000331450 UBR2Q8IWV8 1755 aa21.2■□□□□ 0.99
LRRC28-202ENST00000331450 RNMTO43148 476 aaKnown RBP21.2■□□□□ 0.98
LRRC28-202ENST00000331450 KCNQ2O43526 872 aa21.2■□□□□ 0.98
LRRC28-202ENST00000331450 TRIM37O94972 964 aa21.2■□□□□ 0.98
LRRC28-202ENST00000331450 BCL11BQ9C0K0 894 aaPredicted RBP21.2■□□□□ 0.98
LRRC28-202ENST00000331450 RREB1Q92766 1687 aa21.2■□□□□ 0.98
LRRC28-202ENST00000331450 KDM3BQ7LBC6 1761 aa21.19■□□□□ 0.98
LRRC28-202ENST00000331450 ERVV-2B6SEH9 535 aa21.19■□□□□ 0.98
LRRC28-202ENST00000331450 HTATSF1O43719 755 aaKnown RBP21.19■□□□□ 0.98
LRRC28-202ENST00000331450 PRIM1P49642 420 aaKnown RBP21.19■□□□□ 0.98
LRRC28-202ENST00000331450 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
LRRC28-202ENST00000331450 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
LRRC28-202ENST00000331450 APAF1O14727 1248 aa21.18■□□□□ 0.98
LRRC28-202ENST00000331450 UPF1Q92900 1129 aaKnown RBP eCLIP21.18■□□□□ 0.98
LRRC28-202ENST00000331450 RRP7AQ9Y3A4 280 aaKnown RBP21.17■□□□□ 0.98
LRRC28-202ENST00000331450 CICQ96RK0 1608 aaPredicted RBP21.17■□□□□ 0.98
LRRC28-202ENST00000331450 ZNF831Q5JPB2 1677 aa21.17■□□□□ 0.98
LRRC28-202ENST00000331450 RIPK4P57078 832 aa21.16■□□□□ 0.98
LRRC28-202ENST00000331450 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
LRRC28-202ENST00000331450 SYTL4Q96C24 671 aaPredicted RBP21.15■□□□□ 0.98
LRRC28-202ENST00000331450 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
LRRC28-202ENST00000331450 TRIM35Q9UPQ4 493 aa21.15■□□□□ 0.98
LRRC28-202ENST00000331450 DCTN1Q14203 1278 aa21.14■□□□□ 0.97
LRRC28-202ENST00000331450 MCM10Q7L590 875 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms