RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 MSH6P52701 1360 aa11.04□□□□□ -0.64
CPNE8-201ENST00000331366 CHL1O00533 1208 aa11.04□□□□□ -0.64
CPNE8-201ENST00000331366 NOB1Q9ULX3 412 aaKnown RBP11.04□□□□□ -0.64
CPNE8-201ENST00000331366 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
CPNE8-201ENST00000331366 SIRT2Q8IXJ6 389 aa11.03□□□□□ -0.64
CPNE8-201ENST00000331366 MRE11P49959 708 aa11.03□□□□□ -0.64
CPNE8-201ENST00000331366 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
CPNE8-201ENST00000331366 SPEF2Q9C093 1822 aa11.03□□□□□ -0.64
CPNE8-201ENST00000331366 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
CPNE8-201ENST00000331366 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
CPNE8-201ENST00000331366 COL18A1P39060 1754 aa11.02□□□□□ -0.64
CPNE8-201ENST00000331366 TMEM132EQ6IEE7 984 aa11.02□□□□□ -0.65
CPNE8-201ENST00000331366 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
CPNE8-201ENST00000331366 ZNF445P59923 1031 aa11.02□□□□□ -0.65
CPNE8-201ENST00000331366 ANKRD44Q8N8A2 993 aa11.02□□□□□ -0.65
CPNE8-201ENST00000331366 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
CPNE8-201ENST00000331366 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
CPNE8-201ENST00000331366 PLEKHG5O94827 1062 aa11.01□□□□□ -0.65
CPNE8-201ENST00000331366 TNRQ92752 1358 aa11.01□□□□□ -0.65
CPNE8-201ENST00000331366 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
CPNE8-201ENST00000331366 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.65
CPNE8-201ENST00000331366 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
CPNE8-201ENST00000331366 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
CPNE8-201ENST00000331366 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
CPNE8-201ENST00000331366 CNGB1Q14028 1251 aaPredicted RBP11□□□□□ -0.65
CPNE8-201ENST00000331366 RIPK4P57078 832 aa11□□□□□ -0.65
CPNE8-201ENST00000331366 GLIPR1L2Q4G1C9 344 aa11□□□□□ -0.65
CPNE8-201ENST00000331366 IGSF1Q8N6C5 1336 aa11□□□□□ -0.65
CPNE8-201ENST00000331366 COL15A1P39059 1388 aa10.99□□□□□ -0.65
CPNE8-201ENST00000331366 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
CPNE8-201ENST00000331366 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
CPNE8-201ENST00000331366 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
CPNE8-201ENST00000331366 ROBO2Q9HCK4 1378 aa10.99□□□□□ -0.65
CPNE8-201ENST00000331366 JCADQ9P266 1359 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 RABEP1Q15276 862 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 STAP2Q9UGK3 403 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 HEG1Q9ULI3 1381 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 RGS3P49796 1198 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 TTC22Q5TAA0 569 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 FTSJ3Q8IY81 847 aaKnown RBP10.98□□□□□ -0.65
CPNE8-201ENST00000331366 MBIPQ9NS73 344 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 PRR36Q9H6K5 1346 aa10.98□□□□□ -0.65
CPNE8-201ENST00000331366 CDC45O75419 566 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 ANAPC15P60006 121 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 RGPD2P0DJD1 1756 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 C5P01031 1676 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 XRCC6P12956 609 aaKnown RBP eCLIP10.97□□□□□ -0.65
CPNE8-201ENST00000331366 KLHL40Q2TBA0 621 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 SNRKQ9NRH2 765 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 FLT4P35916 1363 aa10.97□□□□□ -0.65
CPNE8-201ENST00000331366 K7ELQ4 463 aaPredicted RBP10.96□□□□□ -0.65
CPNE8-201ENST00000331366 POGKQ9P215 609 aa10.96□□□□□ -0.65
CPNE8-201ENST00000331366 CUL4AQ13619 759 aa10.96□□□□□ -0.66
CPNE8-201ENST00000331366 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.66
CPNE8-201ENST00000331366 RAPGEF3O95398 923 aa10.96□□□□□ -0.66
CPNE8-201ENST00000331366 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.66
CPNE8-201ENST00000331366 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.66
CPNE8-201ENST00000331366 HOXB7P09629 217 aa10.95□□□□□ -0.66
CPNE8-201ENST00000331366 KCNB2Q92953 911 aa10.95□□□□□ -0.66
CPNE8-201ENST00000331366 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
CPNE8-201ENST00000331366 GSPT1P15170 499 aaKnown RBP10.95□□□□□ -0.66
CPNE8-201ENST00000331366 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
CPNE8-201ENST00000331366 TBC1D9Q6ZT07 1266 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 HSCBQ8IWL3 235 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 USP26Q9BXU7 913 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 PRKAR2BP31323 418 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 GGT6Q6P531 493 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 INTS4Q96HW7 963 aaKnown RBP10.94□□□□□ -0.66
CPNE8-201ENST00000331366 CABP1Q9NZU7 370 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
CPNE8-201ENST00000331366 BRPF3Q9ULD4 1205 aa10.94□□□□□ -0.66
CPNE8-201ENST00000331366 TRAK2O60296 914 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 MCM2P49736 904 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 TJP1Q07157 1748 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 PHACTR3Q96KR7 559 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 GBP4Q96PP9 640 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 RRP7AQ9Y3A4 280 aaKnown RBP10.93□□□□□ -0.66
CPNE8-201ENST00000331366 GOLGA6L3A6NEY3 463 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 HSP90AB1P08238 724 aaKnown RBP10.93□□□□□ -0.66
CPNE8-201ENST00000331366 MCM5P33992 734 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
CPNE8-201ENST00000331366 ARFGEF2Q9Y6D5 1785 aa10.92□□□□□ -0.66
CPNE8-201ENST00000331366 TNPO1Q92973 898 aaKnown RBP10.92□□□□□ -0.66
CPNE8-201ENST00000331366 RFX7Q2KHR2 1363 aa10.92□□□□□ -0.66
CPNE8-201ENST00000331366 NUCB2P80303 420 aa10.92□□□□□ -0.66
CPNE8-201ENST00000331366 SHANK3Q9BYB0 1731 aa10.91□□□□□ -0.66
CPNE8-201ENST00000331366 TWISTNBQ3B726 338 aaPredicted RBP10.91□□□□□ -0.66
CPNE8-201ENST00000331366 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
CPNE8-201ENST00000331366 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
CPNE8-201ENST00000331366 MAP3K5Q99683 1374 aa10.91□□□□□ -0.66
CPNE8-201ENST00000331366 SLC4A3P48751 1232 aa10.91□□□□□ -0.66
CPNE8-201ENST00000331366 SRPK2P78362 688 aaKnown RBP10.91□□□□□ -0.66
CPNE8-201ENST00000331366 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
CPNE8-201ENST00000331366 ARAP2Q8WZ64 1704 aa10.9□□□□□ -0.66
CPNE8-201ENST00000331366 GRPEL1Q9HAV7 217 aa10.9□□□□□ -0.66
CPNE8-201ENST00000331366 CCDC173Q0VFZ6 552 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms