RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 PTGIRP43119 386 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 ERVK-9P63128 1117 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 CYP2U1Q7Z449 544 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 RNF135Q8IUD6 432 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 NXF1Q9UBU9 619 aaKnown RBP3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 ARHGEF11O15085 1522 aa3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 SOBPA7XYQ1 873 aa3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 TERTO14746 1132 aaKnown RBP3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 WFS1O76024 890 aa3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 MYCP01106 439 aaPredicted RBP3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 TREML4Q6UXN2 200 aa3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 NPAS3Q8IXF0 933 aa3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 SLC16A10Q8TF71 515 aa3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 POLMQ9NP87 494 aaPredicted RBP3.46□□□□□ -1.85
CCDC144A-201ENST00000328495 ATP5J2-PTCD1G3V325 749 aa3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 ADD1P35611 737 aaKnown RBP3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 POM121Q96HA1 1249 aa3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 INSM2Q96T92 566 aaPredicted RBP3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 ZNF395Q9H8N7 513 aaPredicted RBP3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 DNMT3LQ9UJW3 386 aa3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 DOLKQ9UPQ8 538 aa3.46□□□□□ -1.86
CCDC144A-201ENST00000328495 CTSOP43234 321 aaPredicted RBP3.45□□□□□ -1.86
CCDC144A-201ENST00000328495 SCTRP47872 440 aa3.45□□□□□ -1.86
CCDC144A-201ENST00000328495 NFX1Q12986 1120 aaKnown RBP3.45□□□□□ -1.86
CCDC144A-201ENST00000328495 SIRT1Q96EB6 747 aa3.45□□□□□ -1.86
CCDC144A-201ENST00000328495 CCDC85AQ96PX6 553 aaPredicted RBP3.45□□□□□ -1.86
CCDC144A-201ENST00000328495 FIGNL2A6NMB9 653 aa3.45□□□□□ -1.86
CCDC144A-201ENST00000328495 MAP7D1Q3KQU3 841 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 PHTF2Q8N3S3 785 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 KDF1Q8NAX2 398 aaPredicted RBP3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 RNF217Q8TC41 542 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 OSBPL3Q9H4L5 887 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 H3BM21 787 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 MEN1O00255 615 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 TRAK2O60296 914 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 USP4Q13107 963 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 OXLD1Q5BKU9 147 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 IRF7Q92985 503 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 NLRP3Q96P20 1036 aa3.44□□□□□ -1.86
CCDC144A-201ENST00000328495 GNRH1P01148 92 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 GPC1P35052 558 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 FOXD4L5Q5VV16 416 aaPredicted RBP3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 PLPP7Q8NBV4 271 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 CDCA7Q9BWT1 371 aaPredicted RBP3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 ARHGEF10LQ9HCE6 1279 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 A0A1W2PRU2 124 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 RNF144AP50876 292 aaPredicted RBP3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 CLN3Q13286 438 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 LYSMD3Q7Z3D4 306 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 PROSER2Q86WR7 435 aaPredicted RBP3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 CHIC2Q9UKJ5 165 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 VEGFBP49765 207 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 PTSQ03393 145 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 ALG2Q9H553 416 aa3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 MED1Q15648 1581 aaPredicted RBP3.43□□□□□ -1.86
CCDC144A-201ENST00000328495 PPFIA3O75145 1194 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 ESCO1Q5FWF5 840 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 SLC27A3Q5K4L6 730 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 NFATC2IPQ8NCF5 419 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 CLUAP1Q96AJ1 413 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 PITPNM2Q9BZ72 1349 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 RB1CC1Q8TDY2 1594 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 A6NJR5 290 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 POM121CA8CG34 1229 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 SKIP12755 728 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 RAB6BQ9NRW1 208 aa3.42□□□□□ -1.86
CCDC144A-201ENST00000328495 PIK3CDO00329 1044 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 LZTS3O60299 673 aaPredicted RBP3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 VSIG8P0DPA2 414 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 GTF2E1P29083 439 aaPredicted RBP3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 EML3Q32P44 896 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 TSGA10IPQ3SY00 556 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 CCDC155Q8N6L0 562 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 ESYT1Q9BSJ8 1104 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 SLC35F4A4IF30 521 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 WIPF1O43516 503 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 PRICKLE2Q7Z3G6 844 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 CNKSR1Q969H4 720 aa3.41□□□□□ -1.86
CCDC144A-201ENST00000328495 IL2RAP01589 272 aa3.4□□□□□ -1.86
CCDC144A-201ENST00000328495 HDGFL1Q5TGJ6 251 aa3.4□□□□□ -1.86
CCDC144A-201ENST00000328495 NOD1Q9Y239 953 aa3.4□□□□□ -1.86
CCDC144A-201ENST00000328495 RHOQP17081 205 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 FNBP4Q8N3X1 1017 aaPredicted RBP3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 ERBB4Q15303 1308 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 USP17L5A8MUK1 530 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 ITGA6P23229 1130 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 GMPRP36959 345 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 INSM1Q01101 510 aaPredicted RBP3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 ADAMTS19Q8TE59 1207 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 XAGE2Q96GT9 111 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 ZSCAN10Q96SZ4 725 aaPredicted RBP3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 GRIP2Q9C0E4 1043 aa3.4□□□□□ -1.87
CCDC144A-201ENST00000328495 SENP3-EIF4A1A0A087X0R7 540 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 SPATA31C2B4DYI2 1134 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 RBAK-RBAKDNI3L0D1 243 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 CENPCQ03188 943 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 NCOA4Q13772 614 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 WDR44Q5JSH3 913 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms