RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 RUNDC1Q96C34 613 aa25.12■■□□□ 1.61
RABGAP1-201ENST00000317419 CCDC9Q9Y3X0 531 aaKnown RBP25.12■■□□□ 1.61
RABGAP1-201ENST00000317419 TATP17735 454 aaPredicted RBP25.11■■□□□ 1.61
RABGAP1-201ENST00000317419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.11■■□□□ 1.618e-8■■■□□ 16.8
RABGAP1-201ENST00000317419 PHACTR3Q96KR7 559 aa25.11■■□□□ 1.61
RABGAP1-201ENST00000317419 RBM6P78332 1123 aaKnown RBP25.08■■□□□ 1.61
RABGAP1-201ENST00000317419 CCDC146Q8IYE0 955 aa25.08■■□□□ 1.61
RABGAP1-201ENST00000317419 AMOTQ4VCS5 1084 aa25.07■■□□□ 1.6
RABGAP1-201ENST00000317419 POTEAQ6S8J7 498 aa25.07■■□□□ 1.6
RABGAP1-201ENST00000317419 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
RABGAP1-201ENST00000317419 SHANK3Q9BYB0 1731 aa25.07■■□□□ 1.6
RABGAP1-201ENST00000317419 LRRC37A3O60309 1634 aa25.07■■□□□ 1.6
RABGAP1-201ENST00000317419 FAM98CQ17RN3 349 aaKnown RBP25.07■■□□□ 1.6
RABGAP1-201ENST00000317419 PLEKHO1Q53GL0 409 aaPredicted RBP25.06■■□□□ 1.6
RABGAP1-201ENST00000317419 TNS2Q63HR2 1409 aa25.05■■□□□ 1.6
RABGAP1-201ENST00000317419 MTHFSDQ2M296 383 aaKnown RBP25.05■■□□□ 1.6
RABGAP1-201ENST00000317419 NCBP3Q53F19 620 aaKnown RBP25.04■■□□□ 1.6
RABGAP1-201ENST00000317419 ZCRB1Q8TBF4 217 aaKnown RBP25.04■■□□□ 1.6
RABGAP1-201ENST00000317419 SPG7Q9UQ90 795 aa25.04■■□□□ 1.6
RABGAP1-201ENST00000317419 MAPK8IP3Q9UPT6 1336 aa25.03■■□□□ 1.6
RABGAP1-201ENST00000317419 GAS2L2Q8NHY3 880 aa25.03■■□□□ 1.6
RABGAP1-201ENST00000317419 NEFMP07197 916 aa25.02■■□□□ 1.6
RABGAP1-201ENST00000317419 NFE2L2Q16236 605 aa25.02■■□□□ 1.6
RABGAP1-201ENST00000317419 RXRBP28702 533 aa25.01■■□□□ 1.59
RABGAP1-201ENST00000317419 TMPOP42166 694 aaKnown RBP25.01■■□□□ 1.59
RABGAP1-201ENST00000317419 APAF1O14727 1248 aa25■■□□□ 1.59
RABGAP1-201ENST00000317419 EXOC5O00471 708 aa25■■□□□ 1.59
RABGAP1-201ENST00000317419 CYP27B1O15528 508 aa24.99■■□□□ 1.59
RABGAP1-201ENST00000317419 DDB1Q16531 1140 aa24.99■■□□□ 1.59
RABGAP1-201ENST00000317419 PCDH11XQ9BZA7 1347 aa24.98■■□□□ 1.59
RABGAP1-201ENST00000317419 PCDH11YQ9BZA8 1340 aa24.98■■□□□ 1.59
RABGAP1-201ENST00000317419 SEPT12Q8IYM1 358 aa24.98■■□□□ 1.59
RABGAP1-201ENST00000317419 AKAP4Q5JQC9 854 aa24.97■■□□□ 1.59
RABGAP1-201ENST00000317419 ZNF530Q6P9A1 599 aaPredicted RBP24.97■■□□□ 1.59
RABGAP1-201ENST00000317419 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
RABGAP1-201ENST00000317419 PHKG2P15735 406 aa24.97■■□□□ 1.59
RABGAP1-201ENST00000317419 NKX1-1Q15270 411 aaPredicted RBP24.97■■□□□ 1.59
RABGAP1-201ENST00000317419 NGEFQ8N5V2 710 aa24.97■■□□□ 1.59
RABGAP1-201ENST00000317419 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
RABGAP1-201ENST00000317419 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.59
RABGAP1-201ENST00000317419 MAP3K5Q99683 1374 aa24.95■■□□□ 1.58
RABGAP1-201ENST00000317419 HTATSF1O43719 755 aaKnown RBP24.95■■□□□ 1.58
RABGAP1-201ENST00000317419 RGS12O14924 1447 aa24.95■■□□□ 1.58
RABGAP1-201ENST00000317419 CCDC27Q2M243 656 aa24.94■■□□□ 1.58
RABGAP1-201ENST00000317419 RIPK4P57078 832 aa24.94■■□□□ 1.58
RABGAP1-201ENST00000317419 TRIM35Q9UPQ4 493 aa24.94■■□□□ 1.58
RABGAP1-201ENST00000317419 RRP7AQ9Y3A4 280 aaKnown RBP24.93■■□□□ 1.58
RABGAP1-201ENST00000317419 GNAT3A8MTJ3 354 aa24.93■■□□□ 1.58
RABGAP1-201ENST00000317419 MARCH10Q8NA82 808 aaPredicted RBP24.93■■□□□ 1.58
RABGAP1-201ENST00000317419 C1orf141Q5JVX7 400 aa24.92■■□□□ 1.58
RABGAP1-201ENST00000317419 BRWD3Q6RI45 1802 aa24.92■■□□□ 1.58
RABGAP1-201ENST00000317419 BCL9O00512 1426 aa24.91■■□□□ 1.58
RABGAP1-201ENST00000317419 DDX54Q8TDD1 881 aaKnown RBP24.91■■□□□ 1.58
RABGAP1-201ENST00000317419 KDM6AO15550 1401 aaPredicted RBP24.9■■□□□ 1.58
RABGAP1-201ENST00000317419 HSP90AB1P08238 724 aaKnown RBP24.9■■□□□ 1.58
RABGAP1-201ENST00000317419 CEMIPQ8WUJ3 1361 aa24.9■■□□□ 1.58
RABGAP1-201ENST00000317419 LMOD3Q0VAK6 560 aa24.89■■□□□ 1.58
RABGAP1-201ENST00000317419 ZNF521Q96K83 1311 aa24.89■■□□□ 1.57
RABGAP1-201ENST00000317419 A0A0G2JS52 829 aa24.88■■□□□ 1.57
RABGAP1-201ENST00000317419 MYT1Q01538 1121 aa24.88■■□□□ 1.57
RABGAP1-201ENST00000317419 PDE3BQ13370 1112 aa24.88■■□□□ 1.57
RABGAP1-201ENST00000317419 IL17REQ8NFR9 667 aa24.88■■□□□ 1.57
RABGAP1-201ENST00000317419 DCAF5Q96JK2 942 aa24.88■■□□□ 1.57
RABGAP1-201ENST00000317419 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
RABGAP1-201ENST00000317419 NEUROD2Q15784 382 aa24.87■■□□□ 1.57
RABGAP1-201ENST00000317419 RNMTO43148 476 aaKnown RBP24.87■■□□□ 1.57
RABGAP1-201ENST00000317419 TOGARAM1Q9Y4F4 1720 aa24.86■■□□□ 1.57
RABGAP1-201ENST00000317419 MRC1P22897 1456 aa24.86■■□□□ 1.57
RABGAP1-201ENST00000317419 HNRNPUQ00839 825 aaKnown RBP eCLIP24.86■■□□□ 1.57
RABGAP1-201ENST00000317419 KRT27Q7Z3Y8 459 aa24.86■■□□□ 1.57
RABGAP1-201ENST00000317419 WWC1Q8IX03 1113 aa24.86■■□□□ 1.57
RABGAP1-201ENST00000317419 LGR6Q9HBX8 967 aa24.86■■□□□ 1.57
RABGAP1-201ENST00000317419 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
RABGAP1-201ENST00000317419 VIRMAQ69YN4 1812 aaKnown RBP24.85■■□□□ 1.57
RABGAP1-201ENST00000317419 SENP3-EIF4A1A0A087X0R7 540 aa24.84■■□□□ 1.57
RABGAP1-201ENST00000317419 RTF1Q92541 710 aaKnown RBP24.84■■□□□ 1.57
RABGAP1-201ENST00000317419 MCM10Q7L590 875 aa24.83■■□□□ 1.57
RABGAP1-201ENST00000317419 DCTN1Q14203 1278 aa24.83■■□□□ 1.56
RABGAP1-201ENST00000317419 ERVV-2B6SEH9 535 aa24.82■■□□□ 1.56
RABGAP1-201ENST00000317419 SIPA1L3O60292 1781 aaPredicted RBP24.81■■□□□ 1.56
RABGAP1-201ENST00000317419 ZBED9Q6R2W3 1325 aa24.81■■□□□ 1.56
RABGAP1-201ENST00000317419 WDR63Q8IWG1 891 aa24.81■■□□□ 1.56
RABGAP1-201ENST00000317419 DOT1LQ8TEK3 1739 aa24.8■■□□□ 1.56
RABGAP1-201ENST00000317419 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
RABGAP1-201ENST00000317419 SALL2Q9Y467 1007 aaPredicted RBP24.8■■□□□ 1.56
RABGAP1-201ENST00000317419 IL16Q14005 1332 aa24.79■■□□□ 1.56
RABGAP1-201ENST00000317419 SLC52A2Q9HAB3 445 aa24.78■■□□□ 1.56
RABGAP1-201ENST00000317419 ZNF853P0CG23 659 aa24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 FAM182BQ5T319 152 aa24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 FAM196AQ6ZSG2 479 aa24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 ITGB4P16144 1822 aa24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 SBF2Q86WG5 1849 aa24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 NHSQ6T4R5 1651 aa24.76■■□□□ 1.55
RABGAP1-201ENST00000317419 BABAM1Q9NWV8 329 aa24.74■■□□□ 1.55
RABGAP1-201ENST00000317419 TEFQ10587 303 aa24.73■■□□□ 1.55
RABGAP1-201ENST00000317419 TAF7Q15545 349 aaPredicted RBP24.73■■□□□ 1.55
RABGAP1-201ENST00000317419 CABP4P57796 275 aa24.73■■□□□ 1.55
RABGAP1-201ENST00000317419 NFATC2IPQ8NCF5 419 aa24.73■■□□□ 1.55
RABGAP1-201ENST00000317419 IFT57Q9NWB7 429 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms