RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ZSCAN25Q6NSZ9 544 aa16.04■□□□□ 0.16
CLCN6-201ENST00000312413 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
CLCN6-201ENST00000312413 ANO10Q9NW15 660 aa16.04■□□□□ 0.16
CLCN6-201ENST00000312413 RRBP1Q9P2E9 1410 aaKnown RBP16.04■□□□□ 0.16
CLCN6-201ENST00000312413 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
CLCN6-201ENST00000312413 SRGAP3O43295 1099 aa16.03■□□□□ 0.16
CLCN6-201ENST00000312413 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
CLCN6-201ENST00000312413 IMMTQ16891 758 aaKnown RBP16.03■□□□□ 0.16
CLCN6-201ENST00000312413 PAF1Q8N7H5 531 aa16.03■□□□□ 0.16
CLCN6-201ENST00000312413 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
CLCN6-201ENST00000312413 KIF5CO60282 957 aa16.03■□□□□ 0.16
CLCN6-201ENST00000312413 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
CLCN6-201ENST00000312413 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
CLCN6-201ENST00000312413 MCM3P25205 808 aa16.03■□□□□ 0.16
CLCN6-201ENST00000312413 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
CLCN6-201ENST00000312413 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.16
CLCN6-201ENST00000312413 FERMT3Q86UX7 667 aa16.02■□□□□ 0.16
CLCN6-201ENST00000312413 ZNF397Q8NF99 534 aaPredicted RBP16.02■□□□□ 0.15
CLCN6-201ENST00000312413 WASF1Q92558 559 aa16.02■□□□□ 0.15
CLCN6-201ENST00000312413 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.15
CLCN6-201ENST00000312413 TNNT1P13805 278 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 WWC2Q6AWC2 1192 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 SULT6B1Q6IMI4 303 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 CASQ1P31415 396 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 IL1RAPL2Q9NP60 686 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 NBPF1Q3BBV0 1214 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 DDX11Q96FC9 970 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
CLCN6-201ENST00000312413 MCM5P33992 734 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 MAP2K1Q02750 393 aaPredicted RBP16■□□□□ 0.15
CLCN6-201ENST00000312413 SPA17Q15506 151 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 SSBP05455 408 aaKnown RBP eCLIP16■□□□□ 0.15
CLCN6-201ENST00000312413 SLFN5Q08AF3 891 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 GAPVD1Q14C86 1478 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 NEMFO60524 1076 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 CCDC184Q52MB2 194 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 UBAC1Q9BSL1 405 aa16■□□□□ 0.15
CLCN6-201ENST00000312413 POLR3GO15318 223 aaPredicted RBP15.99■□□□□ 0.15
CLCN6-201ENST00000312413 CCDC83Q8IWF9 413 aa15.99■□□□□ 0.15
CLCN6-201ENST00000312413 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
CLCN6-201ENST00000312413 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
CLCN6-201ENST00000312413 FKBP4Q02790 459 aaKnown RBP eCLIP15.99■□□□□ 0.15
CLCN6-201ENST00000312413 TMEM57Q8N5G2 664 aa15.99■□□□□ 0.15
CLCN6-201ENST00000312413 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
CLCN6-201ENST00000312413 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
CLCN6-201ENST00000312413 NBPF8Q3BBV2 869 aa15.98■□□□□ 0.15
CLCN6-201ENST00000312413 TNPO1Q92973 898 aaKnown RBP15.98■□□□□ 0.15
CLCN6-201ENST00000312413 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
CLCN6-201ENST00000312413 ATP2B2Q01814 1243 aa15.98■□□□□ 0.15
CLCN6-201ENST00000312413 MICALCLQ6ZW33 695 aa15.98■□□□□ 0.15
CLCN6-201ENST00000312413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLCN6-201ENST00000312413 SSFA2P28290 1259 aa15.97■□□□□ 0.15
CLCN6-201ENST00000312413 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
CLCN6-201ENST00000312413 TBC1D2Q9BYX2 928 aa15.97■□□□□ 0.15
CLCN6-201ENST00000312413 CTAGE5O15320 804 aa15.97■□□□□ 0.15
CLCN6-201ENST00000312413 GTF2F1P35269 517 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLCN6-201ENST00000312413 SH2B1Q9NRF2 756 aaPredicted RBP15.97■□□□□ 0.15
CLCN6-201ENST00000312413 GOLGA6L10A0A0M3HER8 536 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 TRERF1Q96PN7 1200 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 PPP4R3BQ5MIZ7 849 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 CCDC91Q7Z6B0 441 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 KIF21BO75037 1637 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 DYNC1I1O14576 645 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 TDO2P48775 406 aa15.96■□□□□ 0.15
CLCN6-201ENST00000312413 CEP126Q9P2H0 1117 aa15.96■□□□□ 0.14
CLCN6-201ENST00000312413 GPRASP1Q5JY77 1395 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 ATF3P18847 181 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 MX1P20591 662 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 GSDMDP57764 484 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 LUZP1Q86V48 1076 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-201ENST00000312413 IBSPP21815 317 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-201ENST00000312413 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
CLCN6-201ENST00000312413 TRMT1Q9NXH9 659 aaKnown RBP15.95■□□□□ 0.14
CLCN6-201ENST00000312413 EXOC6BQ9Y2D4 811 aa15.95■□□□□ 0.14
CLCN6-201ENST00000312413 PAFAH1B1P43034 410 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 FKBP15Q5T1M5 1219 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 GLRX3O76003 335 aaKnown RBP15.94■□□□□ 0.14
CLCN6-201ENST00000312413 CETN2P41208 172 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 RNF187Q5TA31 235 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-201ENST00000312413 NUTM1Q86Y26 1132 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 PRAM1Q96QH2 718 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 IFFO1Q0D2I5 559 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
CLCN6-201ENST00000312413 DDX19AQ9NUU7 478 aaKnown RBP15.94■□□□□ 0.14
CLCN6-201ENST00000312413 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-201ENST00000312413 IGF1RP08069 1367 aa15.94■□□□□ 0.14
CLCN6-201ENST00000312413 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms