RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 SPAG9O60271 1321 aaKnown RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 USP19O94966 1318 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 ZNF500O60304 480 aaPredicted RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 WDHD1O75717 1129 aaPredicted RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 PSME1Q06323 249 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 FEZ2Q9UHY8 353 aaPredicted RBP11.27□□□□□ -0.61
MMP3-201ENST00000299855 NUP155O75694 1391 aa11.27□□□□□ -0.61
MMP3-201ENST00000299855 ZKSCAN2Q63HK3 967 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
MMP3-201ENST00000299855 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 POGKQ9P215 609 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
MMP3-201ENST00000299855 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 STK25O00506 426 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
MMP3-201ENST00000299855 COPB2P35606 906 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
MMP3-201ENST00000299855 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
MMP3-201ENST00000299855 ANTXR1Q9H6X2 564 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 CHPF2Q9P2E5 772 aa11.26□□□□□ -0.61
MMP3-201ENST00000299855 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 BDNFP23560 247 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 CEBPAP49715 358 aaPredicted RBP11.25□□□□□ -0.61
MMP3-201ENST00000299855 PTPROQ16827 1216 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 GET4Q7L5D6 327 aaPredicted RBP11.25□□□□□ -0.61
MMP3-201ENST00000299855 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 GOLGA6CA6NDK9 693 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 GOLGA6BA6NDN3 693 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 GOLGA6DP0CG33 693 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 HSPA2P54652 639 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
MMP3-201ENST00000299855 PDE3AQ14432 1141 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 PNNQ9H307 717 aaKnown RBP11.25□□□□□ -0.61
MMP3-201ENST00000299855 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
MMP3-201ENST00000299855 CGNL1Q0VF96 1302 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
MMP3-201ENST00000299855 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
MMP3-201ENST00000299855 GOLGA6L3A6NEY3 463 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 RGS3P49796 1198 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 GYS2P54840 703 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 SENP7Q9BQF6 1050 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 GABBR1Q9UBS5 961 aa11.24□□□□□ -0.61
MMP3-201ENST00000299855 ZNF330Q9Y3S2 320 aaPredicted RBP11.24□□□□□ -0.61
MMP3-201ENST00000299855 STK10O94804 968 aaKnown RBP11.23□□□□□ -0.61
MMP3-201ENST00000299855 CSB-PGBD3P0DP91 1061 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 TMF1P82094 1093 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 HSP90AA2PQ14568 343 aaPredicted RBP11.23□□□□□ -0.61
MMP3-201ENST00000299855 C11orf96Q7Z7L8 435 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 TESK2Q96S53 571 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 PANK3Q9H999 370 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 PLEKHH1Q9ULM0 1364 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 RPGRIP1LQ68CZ1 1315 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
MMP3-201ENST00000299855 KCNB2Q92953 911 aa11.23□□□□□ -0.61
MMP3-201ENST00000299855 A2MP01023 1474 aa11.22□□□□□ -0.61
MMP3-201ENST00000299855 CARNS1A5YM72 827 aa11.22□□□□□ -0.61
MMP3-201ENST00000299855 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.61
MMP3-201ENST00000299855 WDR43Q15061 677 aaKnown RBP eCLIP11.22□□□□□ -0.61
MMP3-201ENST00000299855 CC2D1BQ5T0F9 858 aaKnown RBP11.22□□□□□ -0.61
MMP3-201ENST00000299855 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
MMP3-201ENST00000299855 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
MMP3-201ENST00000299855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
MMP3-201ENST00000299855 FBXO9Q9UK97 447 aaPredicted RBP11.22□□□□□ -0.61
MMP3-201ENST00000299855 EIF2AK4Q9P2K8 1649 aaKnown RBP11.22□□□□□ -0.61
MMP3-201ENST00000299855 NKTRP30414 1462 aaKnown RBP11.22□□□□□ -0.61
MMP3-201ENST00000299855 MRE11P49959 708 aa11.21□□□□□ -0.61
MMP3-201ENST00000299855 ERBINQ96RT1 1412 aa11.21□□□□□ -0.61
MMP3-201ENST00000299855 C3P01024 1663 aa11.21□□□□□ -0.61
MMP3-201ENST00000299855 PLXNC1O60486 1568 aa11.21□□□□□ -0.62
MMP3-201ENST00000299855 PPP4CP60510 307 aa11.21□□□□□ -0.62
MMP3-201ENST00000299855 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.62
MMP3-201ENST00000299855 CREBRFQ8IUR6 639 aa11.21□□□□□ -0.62
MMP3-201ENST00000299855 CCAR1Q8IX12 1150 aaKnown RBP11.21□□□□□ -0.62
MMP3-201ENST00000299855 SWAP70Q9UH65 585 aa11.21□□□□□ -0.62
MMP3-201ENST00000299855 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.62
MMP3-201ENST00000299855 NPC1L1Q9UHC9 1359 aa11.2□□□□□ -0.62
MMP3-201ENST00000299855 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
MMP3-201ENST00000299855 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
MMP3-201ENST00000299855 NLRP1Q9C000 1473 aa11.2□□□□□ -0.62
MMP3-201ENST00000299855 PIK3C2GO75747 1445 aa11.2□□□□□ -0.62
MMP3-201ENST00000299855 TBC1D12O60347 775 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 EGFLAMQ63HQ2 1017 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 PCMTD1Q96MG8 357 aaPredicted RBP11.19□□□□□ -0.62
MMP3-201ENST00000299855 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 TLDC2A0PJX2 215 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms