RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 GCC1Q96CN9 775 aa11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 ABCC11Q96J66 1382 aa11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 ADCY5O95622 1261 aa11.19□□□□□ -0.62
HMGCLL1-201ENST00000274901 PYCARDQ9ULZ3 195 aa11.19□□□□□ -0.62
HMGCLL1-201ENST00000274901 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
HMGCLL1-201ENST00000274901 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
HMGCLL1-201ENST00000274901 KCNF1Q9H3M0 494 aa11.19□□□□□ -0.62
HMGCLL1-201ENST00000274901 AP5Z1O43299 807 aa11.18□□□□□ -0.62
HMGCLL1-201ENST00000274901 KNDC1Q76NI1 1749 aa11.18□□□□□ -0.62
HMGCLL1-201ENST00000274901 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
HMGCLL1-201ENST00000274901 MBD3O95983 291 aa11.18□□□□□ -0.62
HMGCLL1-201ENST00000274901 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
HMGCLL1-201ENST00000274901 MYOM2P54296 1465 aa11.18□□□□□ -0.62
HMGCLL1-201ENST00000274901 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 CTIFO43310 598 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 BRD1O95696 1058 aa11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 TTC22Q5TAA0 569 aa11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 ZNF771Q7L3S4 317 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 IPO4Q8TEX9 1081 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
HMGCLL1-201ENST00000274901 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 NCBP1Q09161 790 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 TCHHQ07283 1943 aa11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 IFT172Q9UG01 1749 aa11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 NEURL4Q96JN8 1562 aa11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 U2SURPO15042 1029 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 HCLS1P14317 486 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 NAA30Q147X3 362 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 KIAA1524Q8TCG1 905 aa11.16□□□□□ -0.62
HMGCLL1-201ENST00000274901 TMX3Q96JJ7 454 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 ST18O60284 1047 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 SLFN14P0C7P3 912 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 SDSP20132 328 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 SLC52A1Q9NWF4 448 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 REREQ9P2R6 1566 aa11.15□□□□□ -0.62
HMGCLL1-201ENST00000274901 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 RPGRIP1LQ68CZ1 1315 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 USP48Q86UV5 1035 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 NRXN1Q9ULB1 1477 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 PPLO60437 1756 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 NOL8Q76FK4 1167 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 CTNNA3Q9UI47 895 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 USP32Q8NFA0 1604 aa11.14□□□□□ -0.63
HMGCLL1-201ENST00000274901 PIK3R4Q99570 1358 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 PREX1Q8TCU6 1659 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 ALDH1L2Q3SY69 923 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 OGFRQ9NZT2 677 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 PIK3C2BO00750 1634 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 IL16Q14005 1332 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 CLTCQ00610 1675 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 STK26Q9P289 416 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
HMGCLL1-201ENST00000274901 KCNJ4P48050 445 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 SAFB2Q14151 953 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 UVSSAQ2YD98 709 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 KDM4AO75164 1064 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 NEK4P51957 841 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 FEZ1Q99689 392 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 AGLP35573 1532 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 SBNO2Q9Y2G9 1366 aa11.12□□□□□ -0.63
HMGCLL1-201ENST00000274901 ABCC4O15439 1325 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 ARHGEF40Q8TER5 1519 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 AEBP2Q6ZN18 517 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 SPC24Q8NBT2 197 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 PALD1Q9ULE6 856 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 NEXMIFQ5QGS0 1516 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 APBB1O00213 710 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 FAM184AQ8NB25 1140 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
HMGCLL1-201ENST00000274901 VAMP4O75379 141 aa11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 DCTPP1Q9H773 170 aa11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 DIAPH3Q9NSV4 1193 aa11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 QRICH2Q9H0J4 1663 aa11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 CUL4AQ13619 759 aa11.1□□□□□ -0.63
HMGCLL1-201ENST00000274901 PPP6R1Q9UPN7 881 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms