RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 MCM5P33992 734 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 SFPQP23246 707 aaKnown RBP eCLIP12.4□□□□□ -0.42
OTOF-201ENST00000272371 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 ZNF644Q9H582 1327 aaPredicted RBP12.4□□□□□ -0.42
OTOF-201ENST00000272371 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 CFAP100Q494V2 611 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
OTOF-201ENST00000272371 UACAQ9BZF9 1416 aa12.4□□□□□ -0.43
OTOF-201ENST00000272371 CCDC183Q5T5S1 534 aa12.39□□□□□ -0.43
OTOF-201ENST00000272371 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
OTOF-201ENST00000272371 GTPBP4Q9BZE4 634 aaKnown RBP12.39□□□□□ -0.43
OTOF-201ENST00000272371 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
OTOF-201ENST00000272371 PRIMPOLQ96LW4 560 aa12.39□□□□□ -0.43
OTOF-201ENST00000272371 KRT18P05783 430 aaKnown RBP12.39□□□□□ -0.43
OTOF-201ENST00000272371 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
OTOF-201ENST00000272371 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
OTOF-201ENST00000272371 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
OTOF-201ENST00000272371 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
OTOF-201ENST00000272371 FYB1O15117 783 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 CLIP2Q9UDT6 1046 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 TSPYL4Q9UJ04 414 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
OTOF-201ENST00000272371 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 CAMK4Q16566 473 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 SYNJ2O15056 1496 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 CCDC175P0C221 793 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 IFFO1Q0D2I5 559 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
OTOF-201ENST00000272371 POLA1P09884 1462 aaPredicted RBP12.38□□□□□ -0.43
OTOF-201ENST00000272371 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 IVLP07476 585 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
OTOF-201ENST00000272371 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
OTOF-201ENST00000272371 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
OTOF-201ENST00000272371 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
OTOF-201ENST00000272371 IMMTQ16891 758 aaKnown RBP12.37□□□□□ -0.43
OTOF-201ENST00000272371 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
OTOF-201ENST00000272371 RAI14Q9P0K7 980 aa12.37□□□□□ -0.43
OTOF-201ENST00000272371 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
OTOF-201ENST00000272371 NBPF8Q3BBV2 869 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 SEPT11Q9NVA2 429 aaKnown RBP12.36□□□□□ -0.43
OTOF-201ENST00000272371 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
OTOF-201ENST00000272371 STAMBPO95630 424 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 TRMT1Q9NXH9 659 aaKnown RBP12.36□□□□□ -0.43
OTOF-201ENST00000272371 SMG6Q86US8 1419 aaKnown RBP12.36□□□□□ -0.43
OTOF-201ENST00000272371 CUX1P39880 1505 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
OTOF-201ENST00000272371 TTC31Q49AM3 519 aaPredicted RBP12.36□□□□□ -0.43
OTOF-201ENST00000272371 MTMR7Q9Y216 660 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
OTOF-201ENST00000272371 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
OTOF-201ENST00000272371 NEMFO60524 1076 aa12.35□□□□□ -0.43
OTOF-201ENST00000272371 SPA17Q15506 151 aa12.35□□□□□ -0.43
OTOF-201ENST00000272371 TDO2P48775 406 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
OTOF-201ENST00000272371 SPECC1LQ69YQ0 1117 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 CLCN1P35523 988 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 CLGNO14967 610 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
OTOF-201ENST00000272371 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 GNAI3P08754 354 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 HSPA4P34932 840 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 ANO10Q9NW15 660 aa12.34□□□□□ -0.43
OTOF-201ENST00000272371 TOP1P11387 765 aaKnown RBP12.33□□□□□ -0.43
OTOF-201ENST00000272371 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
OTOF-201ENST00000272371 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
OTOF-201ENST00000272371 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
OTOF-201ENST00000272371 PDIA4P13667 645 aaKnown RBP12.33□□□□□ -0.44
OTOF-201ENST00000272371 SNW1Q13573 536 aaKnown RBP12.33□□□□□ -0.44
OTOF-201ENST00000272371 CCDC178Q5BJE1 867 aa12.33□□□□□ -0.44
OTOF-201ENST00000272371 CCDC83Q8IWF9 413 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 CCDC94Q9BW85 323 aaPredicted RBP12.32□□□□□ -0.44
OTOF-201ENST00000272371 ADCY5O95622 1261 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
OTOF-201ENST00000272371 RSPH14Q9UHP6 348 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 MICALL1Q8N3F8 863 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 TBC1D2BQ9UPU7 963 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 ZHX3Q9H4I2 956 aa12.32□□□□□ -0.44
OTOF-201ENST00000272371 GSDMDP57764 484 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 BCAR3O75815 825 aa12.31□□□□□ -0.44
OTOF-201ENST00000272371 NOL7Q9UMY1 257 aaKnown RBP12.31□□□□□ -0.44
OTOF-201ENST00000272371 HMOX1P09601 288 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms