RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 NUDCQ9Y266 331 aa20.84■□□□□ 0.93
ATP6V1C2-201ENST00000272238 U2AF1L5P0DN76 240 aaPredicted RBP20.83■□□□□ 0.92
ATP6V1C2-201ENST00000272238 U2AF1Q01081 240 aaKnown RBP eCLIP20.83■□□□□ 0.92
ATP6V1C2-201ENST00000272238 EP400Q96L91 3159 aa20.82■□□□□ 0.92
ATP6V1C2-201ENST00000272238 KDRP35968 1356 aa20.82■□□□□ 0.92
ATP6V1C2-201ENST00000272238 PDE3BQ13370 1112 aa20.82■□□□□ 0.92
ATP6V1C2-201ENST00000272238 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
ATP6V1C2-201ENST00000272238 KRT27Q7Z3Y8 459 aa20.81■□□□□ 0.92
ATP6V1C2-201ENST00000272238 EXOC5O00471 708 aa20.8■□□□□ 0.92
ATP6V1C2-201ENST00000272238 MRS2Q9HD23 443 aa20.79■□□□□ 0.92
ATP6V1C2-201ENST00000272238 DOT1LQ8TEK3 1739 aa20.79■□□□□ 0.92
ATP6V1C2-201ENST00000272238 DDX54Q8TDD1 881 aaKnown RBP20.78■□□□□ 0.92
ATP6V1C2-201ENST00000272238 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.92
ATP6V1C2-201ENST00000272238 ZCRB1Q8TBF4 217 aaKnown RBP20.77■□□□□ 0.92
ATP6V1C2-201ENST00000272238 PRKAR2BP31323 418 aa20.76■□□□□ 0.91
ATP6V1C2-201ENST00000272238 PCDH11XQ9BZA7 1347 aa20.75■□□□□ 0.91
ATP6V1C2-201ENST00000272238 PCDH11YQ9BZA8 1340 aa20.75■□□□□ 0.91
ATP6V1C2-201ENST00000272238 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
ATP6V1C2-201ENST00000272238 RSPH6AQ9H0K4 717 aa20.75■□□□□ 0.91
ATP6V1C2-201ENST00000272238 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
ATP6V1C2-201ENST00000272238 SBF2Q86WG5 1849 aa20.74■□□□□ 0.91
ATP6V1C2-201ENST00000272238 TOGARAM1Q9Y4F4 1720 aa20.74■□□□□ 0.91
ATP6V1C2-201ENST00000272238 SPG7Q9UQ90 795 aa20.73■□□□□ 0.91
ATP6V1C2-201ENST00000272238 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
ATP6V1C2-201ENST00000272238 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
ATP6V1C2-201ENST00000272238 KAT6BQ8WYB5 2073 aa20.71■□□□□ 0.91
ATP6V1C2-201ENST00000272238 NHSQ6T4R5 1651 aa20.7■□□□□ 0.91
ATP6V1C2-201ENST00000272238 TNS1Q9HBL0 1735 aaKnown RBP20.7■□□□□ 0.9
ATP6V1C2-201ENST00000272238 CYP27B1O15528 508 aa20.7■□□□□ 0.9
ATP6V1C2-201ENST00000272238 CCDC146Q8IYE0 955 aa20.7■□□□□ 0.9
ATP6V1C2-201ENST00000272238 MIER1Q8N108 512 aa20.7■□□□□ 0.9
ATP6V1C2-201ENST00000272238 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
ATP6V1C2-201ENST00000272238 PLEKHG2Q9H7P9 1386 aa20.69■□□□□ 0.9
ATP6V1C2-201ENST00000272238 FCHSD2O94868 740 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 AMOTQ4VCS5 1084 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 MAPK8IP3Q9UPT6 1336 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 MTHFSDQ2M296 383 aaKnown RBP20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 C1orf141Q5JVX7 400 aa20.68■□□□□ 0.9
ATP6V1C2-201ENST00000272238 NEFMP07197 916 aa20.67■□□□□ 0.9
ATP6V1C2-201ENST00000272238 PHKG2P15735 406 aa20.67■□□□□ 0.9
ATP6V1C2-201ENST00000272238 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
ATP6V1C2-201ENST00000272238 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
ATP6V1C2-201ENST00000272238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
ATP6V1C2-201ENST00000272238 ITGB4P16144 1822 aa20.67■□□□□ 0.9
ATP6V1C2-201ENST00000272238 SCN11AQ9UI33 1791 aa20.66■□□□□ 0.9
ATP6V1C2-201ENST00000272238 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
ATP6V1C2-201ENST00000272238 SYTL4Q96C24 671 aaPredicted RBP20.65■□□□□ 0.9
ATP6V1C2-201ENST00000272238 BTAF1O14981 1849 aa20.65■□□□□ 0.9
ATP6V1C2-201ENST00000272238 TRIM37O94972 964 aa20.64■□□□□ 0.9
ATP6V1C2-201ENST00000272238 KDM6AO15550 1401 aaPredicted RBP20.64■□□□□ 0.89
ATP6V1C2-201ENST00000272238 PNISRQ8TF01 805 aaKnown RBP20.63■□□□□ 0.89
ATP6V1C2-201ENST00000272238 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
ATP6V1C2-201ENST00000272238 MAP3K5Q99683 1374 aa20.63■□□□□ 0.89
ATP6V1C2-201ENST00000272238 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
ATP6V1C2-201ENST00000272238 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
ATP6V1C2-201ENST00000272238 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
ATP6V1C2-201ENST00000272238 PNNQ9H307 717 aaKnown RBP20.62■□□□□ 0.89
ATP6V1C2-201ENST00000272238 BCL9O00512 1426 aa20.61■□□□□ 0.89
ATP6V1C2-201ENST00000272238 KCNQ2O43526 872 aa20.61■□□□□ 0.89
ATP6V1C2-201ENST00000272238 AKAP4Q5JQC9 854 aa20.61■□□□□ 0.89
ATP6V1C2-201ENST00000272238 PTF1AQ7RTS3 328 aa20.61■□□□□ 0.89
ATP6V1C2-201ENST00000272238 CCER2I3L3R5 266 aa20.6■□□□□ 0.89
ATP6V1C2-201ENST00000272238 ADAMTS7Q9UKP4 1686 aa20.6■□□□□ 0.89
ATP6V1C2-201ENST00000272238 RUNDC1Q96C34 613 aa20.59■□□□□ 0.89
ATP6V1C2-201ENST00000272238 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
ATP6V1C2-201ENST00000272238 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
ATP6V1C2-201ENST00000272238 NEUROD2Q15784 382 aa20.59■□□□□ 0.89
ATP6V1C2-201ENST00000272238 PRIM1P49642 420 aaKnown RBP20.58■□□□□ 0.88
ATP6V1C2-201ENST00000272238 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.88
ATP6V1C2-201ENST00000272238 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
ATP6V1C2-201ENST00000272238 SF3B2Q13435 895 aaKnown RBP20.57■□□□□ 0.88
ATP6V1C2-201ENST00000272238 NKX1-1Q15270 411 aaPredicted RBP20.57■□□□□ 0.88
ATP6V1C2-201ENST00000272238 DCAF5Q96JK2 942 aa20.57■□□□□ 0.88
ATP6V1C2-201ENST00000272238 NFE2L2Q16236 605 aa20.55■□□□□ 0.88
ATP6V1C2-201ENST00000272238 LGR6Q9HBX8 967 aa20.55■□□□□ 0.88
ATP6V1C2-201ENST00000272238 SIPA1L3O60292 1781 aaPredicted RBP20.55■□□□□ 0.88
ATP6V1C2-201ENST00000272238 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
ATP6V1C2-201ENST00000272238 MCM10Q7L590 875 aa20.55■□□□□ 0.88
ATP6V1C2-201ENST00000272238 MRC1P22897 1456 aa20.54■□□□□ 0.88
ATP6V1C2-201ENST00000272238 APAF1O14727 1248 aa20.54■□□□□ 0.88
ATP6V1C2-201ENST00000272238 RTF1Q92541 710 aaKnown RBP20.54■□□□□ 0.88
ATP6V1C2-201ENST00000272238 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
ATP6V1C2-201ENST00000272238 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
ATP6V1C2-201ENST00000272238 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
ATP6V1C2-201ENST00000272238 APBA3O96018 575 aa20.53■□□□□ 0.88
ATP6V1C2-201ENST00000272238 RIPK4P57078 832 aa20.53■□□□□ 0.88
ATP6V1C2-201ENST00000272238 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
ATP6V1C2-201ENST00000272238 CABP4P57796 275 aa20.52■□□□□ 0.88
ATP6V1C2-201ENST00000272238 RGPD3A6NKT7 1758 aaPredicted RBP20.52■□□□□ 0.88
ATP6V1C2-201ENST00000272238 RGPD4Q7Z3J3 1758 aa20.52■□□□□ 0.88
ATP6V1C2-201ENST00000272238 PAPPAQ13219 1627 aa20.52■□□□□ 0.87
ATP6V1C2-201ENST00000272238 DEFB132Q7Z7B7 95 aa20.51■□□□□ 0.87
ATP6V1C2-201ENST00000272238 THUMPD2Q9BTF0 503 aaKnown RBP20.51■□□□□ 0.87
ATP6V1C2-201ENST00000272238 SOCS7O14512 581 aa20.51■□□□□ 0.87
ATP6V1C2-201ENST00000272238 LY75O60449 1722 aa20.5■□□□□ 0.87
ATP6V1C2-201ENST00000272238 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
ATP6V1C2-201ENST00000272238 PIGBQ92521 554 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms