RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 HMOX1P09601 288 aa13.13□□□□□ -0.31
RBM48-201ENST00000265732 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
RBM48-201ENST00000265732 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
RBM48-201ENST00000265732 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
RBM48-201ENST00000265732 MEGF6O75095 1541 aa13.13□□□□□ -0.31
RBM48-201ENST00000265732 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
RBM48-201ENST00000265732 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.31
RBM48-201ENST00000265732 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
RBM48-201ENST00000265732 DDX54Q8TDD1 881 aaKnown RBP13.12□□□□□ -0.31
RBM48-201ENST00000265732 NCAPD2Q15021 1401 aa13.11□□□□□ -0.31
RBM48-201ENST00000265732 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
RBM48-201ENST00000265732 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
RBM48-201ENST00000265732 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
RBM48-201ENST00000265732 SPG7Q9UQ90 795 aa13.1□□□□□ -0.31
RBM48-201ENST00000265732 KDRP35968 1356 aa13.09□□□□□ -0.31
RBM48-201ENST00000265732 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
RBM48-201ENST00000265732 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.31
RBM48-201ENST00000265732 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
RBM48-201ENST00000265732 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
RBM48-201ENST00000265732 SBF2Q86WG5 1849 aa13.08□□□□□ -0.32
RBM48-201ENST00000265732 PCDH11XQ9BZA7 1347 aa13.08□□□□□ -0.32
RBM48-201ENST00000265732 PCDH11YQ9BZA8 1340 aa13.08□□□□□ -0.32
RBM48-201ENST00000265732 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
RBM48-201ENST00000265732 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
RBM48-201ENST00000265732 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
RBM48-201ENST00000265732 MRS2Q9HD23 443 aa13.07□□□□□ -0.32
RBM48-201ENST00000265732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■□□ 18.5
RBM48-201ENST00000265732 FCHSD2O94868 740 aa13.06□□□□□ -0.32
RBM48-201ENST00000265732 NEFMP07197 916 aa13.06□□□□□ -0.32
RBM48-201ENST00000265732 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
RBM48-201ENST00000265732 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
RBM48-201ENST00000265732 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
RBM48-201ENST00000265732 CYP27B1O15528 508 aa13.05□□□□□ -0.32
RBM48-201ENST00000265732 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
RBM48-201ENST00000265732 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
RBM48-201ENST00000265732 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
RBM48-201ENST00000265732 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
RBM48-201ENST00000265732 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
RBM48-201ENST00000265732 TRIM37O94972 964 aa13.04□□□□□ -0.32
RBM48-201ENST00000265732 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
RBM48-201ENST00000265732 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
RBM48-201ENST00000265732 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
RBM48-201ENST00000265732 ACSBG1Q96GR2 724 aa13.03□□□□□ -0.32
RBM48-201ENST00000265732 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.32
RBM48-201ENST00000265732 PHKG2P15735 406 aa13.02□□□□□ -0.32
RBM48-201ENST00000265732 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.32
RBM48-201ENST00000265732 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.32
RBM48-201ENST00000265732 ITGB4P16144 1822 aa13.02□□□□□ -0.33
RBM48-201ENST00000265732 DLG5Q8TDM6 1919 aa13.02□□□□□ -0.33
RBM48-201ENST00000265732 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
RBM48-201ENST00000265732 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
RBM48-201ENST00000265732 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
RBM48-201ENST00000265732 SOCS7O14512 581 aa13.01□□□□□ -0.33
RBM48-201ENST00000265732 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
RBM48-201ENST00000265732 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
RBM48-201ENST00000265732 BCL9O00512 1426 aa13□□□□□ -0.33
RBM48-201ENST00000265732 KCNQ2O43526 872 aa13□□□□□ -0.33
RBM48-201ENST00000265732 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
RBM48-201ENST00000265732 CCDC125Q86Z20 511 aa13□□□□□ -0.33
RBM48-201ENST00000265732 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
RBM48-201ENST00000265732 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
RBM48-201ENST00000265732 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
RBM48-201ENST00000265732 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
RBM48-201ENST00000265732 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
RBM48-201ENST00000265732 BTAF1O14981 1849 aa12.99□□□□□ -0.33
RBM48-201ENST00000265732 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
RBM48-201ENST00000265732 MIER1Q8N108 512 aa12.99□□□□□ -0.33
RBM48-201ENST00000265732 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
RBM48-201ENST00000265732 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
RBM48-201ENST00000265732 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
RBM48-201ENST00000265732 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
RBM48-201ENST00000265732 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
RBM48-201ENST00000265732 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
RBM48-201ENST00000265732 APBA3O96018 575 aa12.98□□□□□ -0.33
RBM48-201ENST00000265732 FAM9BQ8IZU0 186 aa12.98□□□□□ -0.33
RBM48-201ENST00000265732 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
RBM48-201ENST00000265732 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
RBM48-201ENST00000265732 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
RBM48-201ENST00000265732 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
RBM48-201ENST00000265732 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
RBM48-201ENST00000265732 BAG6P46379 1132 aa12.96□□□□□ -0.33
RBM48-201ENST00000265732 CCER2I3L3R5 266 aa12.96□□□□□ -0.34
RBM48-201ENST00000265732 NEUROD2Q15784 382 aa12.96□□□□□ -0.34
RBM48-201ENST00000265732 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.34
RBM48-201ENST00000265732 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
RBM48-201ENST00000265732 CABP4P57796 275 aa12.95□□□□□ -0.34
RBM48-201ENST00000265732 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
RBM48-201ENST00000265732 LGR6Q9HBX8 967 aa12.95□□□□□ -0.34
RBM48-201ENST00000265732 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
RBM48-201ENST00000265732 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
RBM48-201ENST00000265732 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
RBM48-201ENST00000265732 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
RBM48-201ENST00000265732 RIPK4P57078 832 aa12.93□□□□□ -0.34
RBM48-201ENST00000265732 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
RBM48-201ENST00000265732 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
RBM48-201ENST00000265732 TMPOP42166 694 aaKnown RBP12.93□□□□□ -0.34
RBM48-201ENST00000265732 TEFQ10587 303 aa12.93□□□□□ -0.34
RBM48-201ENST00000265732 MCM10Q7L590 875 aa12.93□□□□□ -0.34
RBM48-201ENST00000265732 PIGBQ92521 554 aa12.93□□□□□ -0.34
RBM48-201ENST00000265732 APAF1O14727 1248 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms