RNA–Protein interactions for RNA: ENST00000264718.7

GPN1-201, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-201ENST00000264718 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
GPN1-201ENST00000264718 KCNJ4P48050 445 aa17.73■□□□□ 0.43
GPN1-201ENST00000264718 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
GPN1-201ENST00000264718 TSPOAP1O95153 1857 aa17.73■□□□□ 0.43
GPN1-201ENST00000264718 CREBRFQ8IUR6 639 aa17.72■□□□□ 0.43
GPN1-201ENST00000264718 MPNDQ8N594 471 aa17.72■□□□□ 0.43
GPN1-201ENST00000264718 INTS4Q96HW7 963 aaKnown RBP17.72■□□□□ 0.43
GPN1-201ENST00000264718 GLI2P10070 1586 aa17.72■□□□□ 0.43
GPN1-201ENST00000264718 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
GPN1-201ENST00000264718 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
GPN1-201ENST00000264718 CALCOCO1Q9P1Z2 691 aa17.71■□□□□ 0.43
GPN1-201ENST00000264718 CUL4AQ13619 759 aa17.71■□□□□ 0.42
GPN1-201ENST00000264718 TSPYL1Q9H0U9 437 aa17.71■□□□□ 0.42
GPN1-201ENST00000264718 ARHGAP5Q13017 1502 aa17.7■□□□□ 0.42
GPN1-201ENST00000264718 SMTNL1A8MU46 457 aa17.7■□□□□ 0.42
GPN1-201ENST00000264718 TERF2Q15554 542 aa17.7■□□□□ 0.42
GPN1-201ENST00000264718 FOXD4L5Q5VV16 416 aaPredicted RBP17.7■□□□□ 0.42
GPN1-201ENST00000264718 SIRT2Q8IXJ6 389 aa17.7■□□□□ 0.42
GPN1-201ENST00000264718 FOXD4L4Q8WXT5 416 aaPredicted RBP17.7■□□□□ 0.42
GPN1-201ENST00000264718 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
GPN1-201ENST00000264718 TMEM87AQ8NBN3 555 aa17.7■□□□□ 0.42
GPN1-201ENST00000264718 MX1P20591 662 aa17.69■□□□□ 0.42
GPN1-201ENST00000264718 ZBTB22O15209 634 aa17.69■□□□□ 0.42
GPN1-201ENST00000264718 C1orf115Q9H7X2 142 aa17.69■□□□□ 0.42
GPN1-201ENST00000264718 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
GPN1-201ENST00000264718 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
GPN1-201ENST00000264718 KRT222Q8N1A0 295 aa17.68■□□□□ 0.42
GPN1-201ENST00000264718 PYCARDQ9ULZ3 195 aa17.68■□□□□ 0.42
GPN1-201ENST00000264718 KCNF1Q9H3M0 494 aa17.67■□□□□ 0.42
GPN1-201ENST00000264718 ATAD2Q6PL18 1390 aa17.67■□□□□ 0.42
GPN1-201ENST00000264718 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
GPN1-201ENST00000264718 ERC2O15083 957 aa17.67■□□□□ 0.42
GPN1-201ENST00000264718 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
GPN1-201ENST00000264718 USP48Q86UV5 1035 aa17.67■□□□□ 0.42
GPN1-201ENST00000264718 PAXBP1Q9Y5B6 917 aa17.67■□□□□ 0.42
GPN1-201ENST00000264718 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
GPN1-201ENST00000264718 PLCH2O75038 1416 aa17.66■□□□□ 0.42
GPN1-201ENST00000264718 ABCC4O15439 1325 aa17.66■□□□□ 0.42
GPN1-201ENST00000264718 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
GPN1-201ENST00000264718 KIF18AQ8NI77 898 aa17.66■□□□□ 0.42
GPN1-201ENST00000264718 GADD45BO75293 160 aaPredicted RBP17.65■□□□□ 0.42
GPN1-201ENST00000264718 NEK4P51957 841 aa17.65■□□□□ 0.42
GPN1-201ENST00000264718 SETBP1Q9Y6X0 1596 aa17.65■□□□□ 0.42
GPN1-201ENST00000264718 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
GPN1-201ENST00000264718 TET3O43151 1660 aa17.65■□□□□ 0.42
GPN1-201ENST00000264718 TULP2O00295 520 aa17.64■□□□□ 0.42
GPN1-201ENST00000264718 SDSP20132 328 aa17.64■□□□□ 0.42
GPN1-201ENST00000264718 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
GPN1-201ENST00000264718 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
GPN1-201ENST00000264718 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
GPN1-201ENST00000264718 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
GPN1-201ENST00000264718 FANCAO15360 1455 aa17.63■□□□□ 0.41
GPN1-201ENST00000264718 MCCP23508 829 aa17.62■□□□□ 0.41
GPN1-201ENST00000264718 UBE2HP62256 183 aa17.62■□□□□ 0.41
GPN1-201ENST00000264718 CCDC112Q8NEF3 446 aa17.62■□□□□ 0.41
GPN1-201ENST00000264718 PLCB2Q00722 1185 aa17.62■□□□□ 0.41
GPN1-201ENST00000264718 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
GPN1-201ENST00000264718 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
GPN1-201ENST00000264718 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
GPN1-201ENST00000264718 ANAPC15P60006 121 aa17.61■□□□□ 0.41
GPN1-201ENST00000264718 FUCA2Q9BTY2 467 aa17.61■□□□□ 0.41
GPN1-201ENST00000264718 RTL1A6NKG5 1358 aa17.6■□□□□ 0.41
GPN1-201ENST00000264718 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
GPN1-201ENST00000264718 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
GPN1-201ENST00000264718 NRXN1Q9ULB1 1477 aa17.6■□□□□ 0.41
GPN1-201ENST00000264718 GDPD2Q9HCC8 539 aa17.6■□□□□ 0.41
GPN1-201ENST00000264718 KIF1BO60333 1816 aa17.6■□□□□ 0.41
GPN1-201ENST00000264718 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
GPN1-201ENST00000264718 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
GPN1-201ENST00000264718 RGS12O14924 1447 aa17.59■□□□□ 0.41
GPN1-201ENST00000264718 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
GPN1-201ENST00000264718 SMARCA5O60264 1052 aaPredicted RBP17.59■□□□□ 0.41
GPN1-201ENST00000264718 EFCAB2Q5VUJ9 269 aa17.59■□□□□ 0.41
GPN1-201ENST00000264718 FAM53CQ9NYF3 392 aa17.59■□□□□ 0.41
GPN1-201ENST00000264718 TCHHQ07283 1943 aa17.59■□□□□ 0.41
GPN1-201ENST00000264718 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
GPN1-201ENST00000264718 TNNT1P13805 278 aa17.58■□□□□ 0.4
GPN1-201ENST00000264718 SPC24Q8NBT2 197 aa17.58■□□□□ 0.4
GPN1-201ENST00000264718 ADGRF5Q8IZF2 1346 aa17.57■□□□□ 0.4
GPN1-201ENST00000264718 VAMP4O75379 141 aa17.57■□□□□ 0.4
GPN1-201ENST00000264718 ATP6V1DQ9Y5K8 247 aa17.57■□□□□ 0.4
GPN1-201ENST00000264718 SLFNL1Q499Z3 407 aa17.56■□□□□ 0.4
GPN1-201ENST00000264718 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
GPN1-201ENST00000264718 C16orf45Q96MC5 204 aaPredicted RBP17.56■□□□□ 0.4
GPN1-201ENST00000264718 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
GPN1-201ENST00000264718 AP5Z1O43299 807 aa17.56■□□□□ 0.4
GPN1-201ENST00000264718 CCDC192P0DO97 292 aa17.56■□□□□ 0.4
GPN1-201ENST00000264718 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
GPN1-201ENST00000264718 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
GPN1-201ENST00000264718 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
GPN1-201ENST00000264718 IFT57Q9NWB7 429 aa17.56■□□□□ 0.4
GPN1-201ENST00000264718 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.56■□□□□ 0.4
GPN1-201ENST00000264718 PTGS1P23219 599 aa17.55■□□□□ 0.4
GPN1-201ENST00000264718 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
GPN1-201ENST00000264718 SRCIN1Q9C0H9 1055 aa17.55■□□□□ 0.4
GPN1-201ENST00000264718 FAM135BQ49AJ0 1406 aa17.54■□□□□ 0.4
GPN1-201ENST00000264718 CAPN2P17655 700 aa17.54■□□□□ 0.4
GPN1-201ENST00000264718 FOXD4L6Q3SYB3 417 aaPredicted RBP17.54■□□□□ 0.4
GPN1-201ENST00000264718 FOXD4L3Q6VB84 417 aaPredicted RBP17.54■□□□□ 0.4
GPN1-201ENST00000264718 SSH2Q76I76 1423 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms