RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 RASSF8Q8NHQ8 419 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 USP19O94966 1318 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 URI1O94763 535 aaPredicted RBP17.85■□□□□ 0.45
CASC3-201ENST00000264645 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
CASC3-201ENST00000264645 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
CASC3-201ENST00000264645 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
CASC3-201ENST00000264645 RIOK3O14730 519 aaKnown RBP17.84■□□□□ 0.45
CASC3-201ENST00000264645 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
CASC3-201ENST00000264645 CCP110O43303 1012 aa17.84■□□□□ 0.45
CASC3-201ENST00000264645 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
CASC3-201ENST00000264645 BLOC1S2Q6QNY1 142 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 PIBF1Q8WXW3 757 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 ZFP91Q96JP5 570 aaPredicted RBP17.83■□□□□ 0.45
CASC3-201ENST00000264645 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 PAXBP1Q9Y5B6 917 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 SFPQP23246 707 aaKnown RBP eCLIP17.83■□□□□ 0.45
CASC3-201ENST00000264645 DDX11Q96FC9 970 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 TOPBP1Q92547 1522 aa17.83■□□□□ 0.45
CASC3-201ENST00000264645 PTGS1P23219 599 aa17.83■□□□□ 0.44
CASC3-201ENST00000264645 STK38Q15208 465 aa17.83■□□□□ 0.44
CASC3-201ENST00000264645 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.44
CASC3-201ENST00000264645 TSPYL1Q9H0U9 437 aa17.83■□□□□ 0.44
CASC3-201ENST00000264645 TEFQ10587 303 aa17.83■□□□□ 0.44
CASC3-201ENST00000264645 CCDC70Q6NSX1 233 aa17.83■□□□□ 0.44
CASC3-201ENST00000264645 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.44
CASC3-201ENST00000264645 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
CASC3-201ENST00000264645 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
CASC3-201ENST00000264645 F6X3S4 739 aa17.82■□□□□ 0.44
CASC3-201ENST00000264645 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
CASC3-201ENST00000264645 FEZ1Q99689 392 aa17.82■□□□□ 0.44
CASC3-201ENST00000264645 KIF2AO00139 706 aaPredicted RBP17.82■□□□□ 0.44
CASC3-201ENST00000264645 BMS1Q14692 1282 aaKnown RBP17.82■□□□□ 0.44
CASC3-201ENST00000264645 KDM4AO75164 1064 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
CASC3-201ENST00000264645 PKP1Q13835 747 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 ABCC11Q96J66 1382 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 OGFRQ9NZT2 677 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
CASC3-201ENST00000264645 SCAND2PQ9GZW5 306 aaPredicted RBP17.81■□□□□ 0.44
CASC3-201ENST00000264645 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 IPO7O95373 1038 aaKnown RBP17.81■□□□□ 0.44
CASC3-201ENST00000264645 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
CASC3-201ENST00000264645 PRAG1Q86YV5 1406 aa17.8■□□□□ 0.44
CASC3-201ENST00000264645 DEF6Q9H4E7 631 aa17.8■□□□□ 0.44
CASC3-201ENST00000264645 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
CASC3-201ENST00000264645 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
CASC3-201ENST00000264645 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
CASC3-201ENST00000264645 SRGAP3O43295 1099 aa17.8■□□□□ 0.44
CASC3-201ENST00000264645 AXDND1Q5T1B0 1012 aaPredicted RBP17.8■□□□□ 0.44
CASC3-201ENST00000264645 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
CASC3-201ENST00000264645 GJB2P29033 226 aa17.79■□□□□ 0.44
CASC3-201ENST00000264645 CFAP45Q9UL16 551 aa17.79■□□□□ 0.44
CASC3-201ENST00000264645 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
CASC3-201ENST00000264645 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
CASC3-201ENST00000264645 TRIM29Q14134 588 aa17.79■□□□□ 0.44
CASC3-201ENST00000264645 CCDC102AQ96A19 550 aa17.79■□□□□ 0.44
CASC3-201ENST00000264645 ZNF396Q96N95 335 aaPredicted RBP17.79■□□□□ 0.44
CASC3-201ENST00000264645 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
CASC3-201ENST00000264645 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 ADGRF5Q8IZF2 1346 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 PLEKHM2Q8IWE5 1019 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
CASC3-201ENST00000264645 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 DNM1Q05193 864 aaKnown RBP17.78■□□□□ 0.44
CASC3-201ENST00000264645 ANKRD1Q15327 319 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 RUFY1Q96T51 708 aa17.78■□□□□ 0.44
CASC3-201ENST00000264645 SKILP12757 684 aa17.77■□□□□ 0.44
CASC3-201ENST00000264645 HOOK1Q9UJC3 728 aaKnown RBP17.77■□□□□ 0.44
CASC3-201ENST00000264645 GRIN2BQ13224 1484 aa17.77■□□□□ 0.44
CASC3-201ENST00000264645 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
CASC3-201ENST00000264645 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
CASC3-201ENST00000264645 CD2BP2O95400 341 aaKnown RBP17.77■□□□□ 0.43
CASC3-201ENST00000264645 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.43
CASC3-201ENST00000264645 ANO6Q4KMQ2 910 aa17.77■□□□□ 0.43
CASC3-201ENST00000264645 TAF7LQ5H9L4 462 aa17.77■□□□□ 0.43
CASC3-201ENST00000264645 ERCC4Q92889 916 aaPredicted RBP17.77■□□□□ 0.43
CASC3-201ENST00000264645 NESP48681 1621 aa17.76■□□□□ 0.43
CASC3-201ENST00000264645 RAB11FIP3O75154 756 aa17.76■□□□□ 0.43
CASC3-201ENST00000264645 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
CASC3-201ENST00000264645 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
CASC3-201ENST00000264645 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
CASC3-201ENST00000264645 MCM10Q7L590 875 aa17.76■□□□□ 0.43
CASC3-201ENST00000264645 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
CASC3-201ENST00000264645 DDX19AQ9NUU7 478 aaKnown RBP17.75■□□□□ 0.43
CASC3-201ENST00000264645 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
CASC3-201ENST00000264645 LMAN1P49257 510 aa17.75■□□□□ 0.43
CASC3-201ENST00000264645 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
CASC3-201ENST00000264645 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
CASC3-201ENST00000264645 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
CASC3-201ENST00000264645 DMTNQ08495 405 aa17.75■□□□□ 0.43
CASC3-201ENST00000264645 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
CASC3-201ENST00000264645 TMX1Q9H3N1 280 aa17.75■□□□□ 0.43
CASC3-201ENST00000264645 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms