RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
SMG6-201ENST00000263073 CABP1Q9NZU7 370 aa14.21□□□□□ -0.13
SMG6-201ENST00000263073 PTPN14Q15678 1187 aa14.21□□□□□ -0.13
SMG6-201ENST00000263073 MYO6Q9UM54 1294 aa14.21□□□□□ -0.13
SMG6-201ENST00000263073 KLHL34Q8N239 644 aa14.21□□□□□ -0.14
SMG6-201ENST00000263073 URI1O94763 535 aaPredicted RBP14.2□□□□□ -0.14
SMG6-201ENST00000263073 CCDC158Q5M9N0 1113 aa14.2□□□□□ -0.14
SMG6-201ENST00000263073 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
SMG6-201ENST00000263073 SYCP1Q15431 976 aa14.2□□□□□ -0.14
SMG6-201ENST00000263073 TMCO3Q6UWJ1 677 aa14.2□□□□□ -0.14
SMG6-201ENST00000263073 SSBP05455 408 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMG6-201ENST00000263073 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.147e-9■■■■■ 32
SMG6-201ENST00000263073 TXNDC2Q86VQ3 553 aa14.2□□□□□ -0.14
SMG6-201ENST00000263073 ANKRD1Q15327 319 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 TMEM132AQ24JP5 1023 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 KLHL10Q6JEL2 608 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 CLIP2Q9UDT6 1046 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 CBFA2T2O43439 604 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 CCT4P50991 539 aaKnown RBP14.19□□□□□ -0.14
SMG6-201ENST00000263073 KIAA1328Q86T90 577 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 ERC1Q8IUD2 1116 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 JMYQ8N9B5 988 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
SMG6-201ENST00000263073 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
SMG6-201ENST00000263073 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■■■■□ 26.3
SMG6-201ENST00000263073 GAS2L2Q8NHY3 880 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 TNNT1P13805 278 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 ISM2Q6H9L7 571 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 WDR63Q8IWG1 891 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 IGF1RP08069 1367 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 AFAP1Q8N556 730 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 PANK2Q9BZ23 570 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 GPATCH11Q8N954 259 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 CUX1P39880 1505 aa14.18□□□□□ -0.14
SMG6-201ENST00000263073 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
SMG6-201ENST00000263073 SEPT7Q16181 437 aaKnown RBP14.18□□□□□ -0.14
SMG6-201ENST00000263073 ARHGAP29Q52LW3 1261 aa14.17□□□□□ -0.14
SMG6-201ENST00000263073 TSHZ3Q63HK5 1081 aa14.17□□□□□ -0.14
SMG6-201ENST00000263073 ERLIN2O94905 339 aa14.17□□□□□ -0.14
SMG6-201ENST00000263073 DACH1Q9UI36 760 aa14.17□□□□□ -0.14
SMG6-201ENST00000263073 CASQ1P31415 396 aa14.17□□□□□ -0.14
SMG6-201ENST00000263073 SRRTQ9BXP5 876 aaKnown RBP14.17□□□□□ -0.14
SMG6-201ENST00000263073 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 CFAP45Q9UL16 551 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 DHX8Q14562 1220 aaKnown RBP14.16□□□□□ -0.14
SMG6-201ENST00000263073 ERBINQ96RT1 1412 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 MCM10Q7L590 875 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 TICAM2Q86XR7 235 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 PDCL3Q9H2J4 239 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 BIN1O00499 593 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 CCDC183Q5T5S1 534 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 RAI14Q9P0K7 980 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 ADCY5O95622 1261 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 CCDC82Q8N4S0 544 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
SMG6-201ENST00000263073 EIF5P55010 431 aaKnown RBP14.15□□□□□ -0.14
SMG6-201ENST00000263073 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 IPO4Q8TEX9 1081 aaKnown RBP14.15□□□□□ -0.14
SMG6-201ENST00000263073 IGHDP01880 384 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 TFIP11Q9UBB9 837 aaKnown RBP14.15□□□□□ -0.14
SMG6-201ENST00000263073 ZSWIM4Q9H7M6 989 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
SMG6-201ENST00000263073 F6X3S4 739 aa14.14□□□□□ -0.15
SMG6-201ENST00000263073 SFPQP23246 707 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMG6-201ENST00000263073 STIM1Q13586 685 aa14.14□□□□□ -0.15
SMG6-201ENST00000263073 SSH1Q8WYL5 1049 aa14.14□□□□□ -0.15
SMG6-201ENST00000263073 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
SMG6-201ENST00000263073 BCCIPQ9P287 314 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMG6-201ENST00000263073 PIP4K2AP48426 406 aaPredicted RBP14.13□□□□□ -0.15
SMG6-201ENST00000263073 BOLA2Q9H3K6 86 aa14.13□□□□□ -0.15
SMG6-201ENST00000263073 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
SMG6-201ENST00000263073 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.13□□□□□ -0.155e-6■■■■□ 24.1
SMG6-201ENST00000263073 SMTNL1A8MU46 457 aa14.13□□□□□ -0.15
SMG6-201ENST00000263073 TMPOP42166 694 aaKnown RBP14.13□□□□□ -0.15
SMG6-201ENST00000263073 RARSP54136 660 aaKnown RBP14.13□□□□□ -0.15
SMG6-201ENST00000263073 MX1P20591 662 aa14.13□□□□□ -0.15
SMG6-201ENST00000263073 KIF18AQ8NI77 898 aa14.13□□□□□ -0.15
SMG6-201ENST00000263073 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
SMG6-201ENST00000263073 IGSF3O75054 1194 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 CRACR2AQ9BSW2 395 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 RRBP1Q9P2E9 1410 aaKnown RBP14.12□□□□□ -0.15
SMG6-201ENST00000263073 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
SMG6-201ENST00000263073 RNF187Q5TA31 235 aaPredicted RBP14.12□□□□□ -0.15
SMG6-201ENST00000263073 MEX3CQ5U5Q3 659 aaKnown RBP14.12□□□□□ -0.15
SMG6-201ENST00000263073 RAB11FIP4Q86YS3 637 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 TDO2P48775 406 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 SPG7Q9UQ90 795 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
SMG6-201ENST00000263073 GIMAP7Q8NHV1 300 aa14.12□□□□□ -0.15
SMG6-201ENST00000263073 IDH1O75874 414 aaKnown RBP14.11□□□□□ -0.15
SMG6-201ENST00000263073 SSR1P43307 286 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms