RNA–Protein interactions for RNA: ENST00000262942.9

ARPC1A-201, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1A, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-201ENST00000262942 DOT1LQ8TEK3 1739 aa18.85■□□□□ 0.61
ARPC1A-201ENST00000262942 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
ARPC1A-201ENST00000262942 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
ARPC1A-201ENST00000262942 THRAP3Q9Y2W1 955 aaKnown RBP18.85■□□□□ 0.61
ARPC1A-201ENST00000262942 TNS2Q63HR2 1409 aa18.84■□□□□ 0.61
ARPC1A-201ENST00000262942 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
ARPC1A-201ENST00000262942 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
ARPC1A-201ENST00000262942 PLEKHF1Q96S99 279 aa18.84■□□□□ 0.61
ARPC1A-201ENST00000262942 PRKAR2BP31323 418 aa18.83■□□□□ 0.6
ARPC1A-201ENST00000262942 FAM98CQ17RN3 349 aaKnown RBP18.83■□□□□ 0.6
ARPC1A-201ENST00000262942 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.6
ARPC1A-201ENST00000262942 FCHSD2O94868 740 aa18.82■□□□□ 0.6
ARPC1A-201ENST00000262942 IL2RBP14784 551 aa18.82■□□□□ 0.6
ARPC1A-201ENST00000262942 RGS12O14924 1447 aa18.82■□□□□ 0.6
ARPC1A-201ENST00000262942 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
ARPC1A-201ENST00000262942 KAT6BQ8WYB5 2073 aa18.81■□□□□ 0.6
ARPC1A-201ENST00000262942 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
ARPC1A-201ENST00000262942 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
ARPC1A-201ENST00000262942 RBM6P78332 1123 aaKnown RBP18.8■□□□□ 0.6
ARPC1A-201ENST00000262942 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
ARPC1A-201ENST00000262942 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
ARPC1A-201ENST00000262942 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
ARPC1A-201ENST00000262942 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
ARPC1A-201ENST00000262942 NHSQ6T4R5 1651 aa18.76■□□□□ 0.59
ARPC1A-201ENST00000262942 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
ARPC1A-201ENST00000262942 RXRBP28702 533 aa18.75■□□□□ 0.59
ARPC1A-201ENST00000262942 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
ARPC1A-201ENST00000262942 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
ARPC1A-201ENST00000262942 SENP3-EIF4A1A0A087X0R7 540 aa18.73■□□□□ 0.59
ARPC1A-201ENST00000262942 CYP27B1O15528 508 aa18.73■□□□□ 0.59
ARPC1A-201ENST00000262942 ZCRB1Q8TBF4 217 aaKnown RBP18.73■□□□□ 0.59
ARPC1A-201ENST00000262942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.73■□□□□ 0.59
ARPC1A-201ENST00000262942 BTAF1O14981 1849 aa18.73■□□□□ 0.59
ARPC1A-201ENST00000262942 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 DDB1Q16531 1140 aa18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 PLEKHO1Q53GL0 409 aaPredicted RBP18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 AMOTQ4VCS5 1084 aa18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 TNS1Q9HBL0 1735 aaKnown RBP18.72■□□□□ 0.59
ARPC1A-201ENST00000262942 A0A0G2JS52 829 aa18.71■□□□□ 0.59
ARPC1A-201ENST00000262942 APAF1O14727 1248 aa18.71■□□□□ 0.59
ARPC1A-201ENST00000262942 MYT1Q01538 1121 aa18.71■□□□□ 0.59
ARPC1A-201ENST00000262942 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
ARPC1A-201ENST00000262942 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
ARPC1A-201ENST00000262942 MRC1P22897 1456 aa18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 EXOC5O00471 708 aa18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 PHKG2P15735 406 aa18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 MARCH10Q8NA82 808 aaPredicted RBP18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 RRP7AQ9Y3A4 280 aaKnown RBP18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 EP400Q96L91 3159 aa18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 MAP3K5Q99683 1374 aa18.7■□□□□ 0.58
ARPC1A-201ENST00000262942 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
ARPC1A-201ENST00000262942 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
ARPC1A-201ENST00000262942 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
ARPC1A-201ENST00000262942 NEFMP07197 916 aa18.67■□□□□ 0.58
ARPC1A-201ENST00000262942 AKAP4Q5JQC9 854 aa18.67■□□□□ 0.58
ARPC1A-201ENST00000262942 IFNL2Q8IZJ0 200 aa18.67■□□□□ 0.58
ARPC1A-201ENST00000262942 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
ARPC1A-201ENST00000262942 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
ARPC1A-201ENST00000262942 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
ARPC1A-201ENST00000262942 BCL9O00512 1426 aa18.64■□□□□ 0.58
ARPC1A-201ENST00000262942 RIPK4P57078 832 aa18.64■□□□□ 0.58
ARPC1A-201ENST00000262942 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.58
ARPC1A-201ENST00000262942 C1orf141Q5JVX7 400 aa18.64■□□□□ 0.58
ARPC1A-201ENST00000262942 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 LY75O60449 1722 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 PDE3BQ13370 1112 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
ARPC1A-201ENST00000262942 LGR6Q9HBX8 967 aa18.63■□□□□ 0.57
ARPC1A-201ENST00000262942 MCM10Q7L590 875 aa18.62■□□□□ 0.57
ARPC1A-201ENST00000262942 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
ARPC1A-201ENST00000262942 RNMTO43148 476 aaKnown RBP18.61■□□□□ 0.57
ARPC1A-201ENST00000262942 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
ARPC1A-201ENST00000262942 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
ARPC1A-201ENST00000262942 C5P01031 1676 aa18.61■□□□□ 0.57
ARPC1A-201ENST00000262942 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
ARPC1A-201ENST00000262942 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
ARPC1A-201ENST00000262942 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
ARPC1A-201ENST00000262942 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 CCDC27Q2M243 656 aa18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 ZNF521Q96K83 1311 aa18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 HNRNPUQ00839 825 aaKnown RBP eCLIP18.59■□□□□ 0.57
ARPC1A-201ENST00000262942 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
ARPC1A-201ENST00000262942 TJP1Q07157 1748 aa18.57■□□□□ 0.56
ARPC1A-201ENST00000262942 CICQ96RK0 1608 aaPredicted RBP18.57■□□□□ 0.56
ARPC1A-201ENST00000262942 WWC1Q8IX03 1113 aa18.57■□□□□ 0.56
ARPC1A-201ENST00000262942 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
ARPC1A-201ENST00000262942 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms