RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 SNX21Q969T3 373 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 MX1P20591 662 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 SULT6B1Q6IMI4 303 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 IL1RAPL2Q9NP60 686 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 MAP4K4O95819 1239 aaPredicted RBP12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 CCDC83Q8IWF9 413 aa12.75□□□□□ -0.37
CSNK1A1-201ENST00000261798 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 NSD3Q9BZ95 1437 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 NOLC1Q14978 699 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 MAPKBP1O60336 1514 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 HDAC1Q13547 482 aaPredicted RBP12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 PAXBP1Q9Y5B6 917 aa12.74□□□□□ -0.37
CSNK1A1-201ENST00000261798 URI1O94763 535 aaPredicted RBP12.73□□□□□ -0.37
CSNK1A1-201ENST00000261798 LIMCH1Q9UPQ0 1083 aa12.73□□□□□ -0.37
CSNK1A1-201ENST00000261798 TXLNAP40222 546 aa12.73□□□□□ -0.37
CSNK1A1-201ENST00000261798 BMS1Q14692 1282 aaKnown RBP12.73□□□□□ -0.37
CSNK1A1-201ENST00000261798 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
CSNK1A1-201ENST00000261798 CTAGE5O15320 804 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 CAVIN2O95810 425 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 GSDMDP57764 484 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 UBE2HP62256 183 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 KRT222Q8N1A0 295 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
CSNK1A1-201ENST00000261798 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 LUC7LQ9NQ29 371 aaKnown RBP12.71□□□□□ -0.37
CSNK1A1-201ENST00000261798 SMC5Q8IY18 1101 aa12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 POLR3GO15318 223 aaPredicted RBP12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 EPS15P42566 896 aa12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 CKAP2LQ8IYA6 745 aa12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 CABP1Q9NZU7 370 aa12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.38
CSNK1A1-201ENST00000261798 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 AACSQ86V21 672 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 GOLGA6L7A0A1B0GV03 622 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 TRIM22Q8IYM9 498 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 TXLNBQ8N3L3 684 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 TRMT1Q9NXH9 659 aaKnown RBP12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 STX6O43752 255 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 KDM4AO75164 1064 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 ZNF165P49910 485 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 NLRP6P59044 892 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
CSNK1A1-201ENST00000261798 NUCB1Q02818 461 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 JAKMIP3Q5VZ66 844 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 RAPGEF4Q8WZA2 1011 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 CDKL5O76039 1030 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 ERLIN2O94905 339 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 EVA1CP58658 441 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 STIM1Q13586 685 aa12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
CSNK1A1-201ENST00000261798 FAM193AP78312 1265 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 VPS37DQ86XT2 251 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 PCF11O94913 1555 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 SHTN1A0MZ66 631 aa12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 CT47A1Q5JQC4 288 aaPredicted RBP12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
CSNK1A1-201ENST00000261798 TOP1P11387 765 aaKnown RBP12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 SMAP1Q8IYB5 467 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms