RNA–Protein interactions for RNA: ENST00000261531.11

SNW1-201, Transcript of SNW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNW1, Length 2,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-201ENST00000261531 DDB1Q16531 1140 aa12.13□□□□□ -0.47
SNW1-201ENST00000261531 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
SNW1-201ENST00000261531 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
SNW1-201ENST00000261531 IL2RBP14784 551 aa12.13□□□□□ -0.47
SNW1-201ENST00000261531 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
SNW1-201ENST00000261531 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
SNW1-201ENST00000261531 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
SNW1-201ENST00000261531 EYA1Q99502 592 aa12.12□□□□□ -0.47
SNW1-201ENST00000261531 EXOC5O00471 708 aa12.12□□□□□ -0.47
SNW1-201ENST00000261531 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
SNW1-201ENST00000261531 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
SNW1-201ENST00000261531 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
SNW1-201ENST00000261531 PPP2R1AP30153 589 aa12.11□□□□□ -0.47
SNW1-201ENST00000261531 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
SNW1-201ENST00000261531 RAPGEF4Q8WZA2 1011 aa12.1□□□□□ -0.47
SNW1-201ENST00000261531 RCAN3Q9UKA8 241 aa12.1□□□□□ -0.47
SNW1-201ENST00000261531 WNK3Q9BYP7 1800 aa12.1□□□□□ -0.47
SNW1-201ENST00000261531 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.472e-9■□□□□ 9.5
SNW1-201ENST00000261531 IL13P35225 146 aa12.09□□□□□ -0.47
SNW1-201ENST00000261531 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
SNW1-201ENST00000261531 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
SNW1-201ENST00000261531 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
SNW1-201ENST00000261531 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
SNW1-201ENST00000261531 MEGF6O75095 1541 aa12.08□□□□□ -0.48
SNW1-201ENST00000261531 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
SNW1-201ENST00000261531 IGSF1Q8N6C5 1336 aa12.07□□□□□ -0.48
SNW1-201ENST00000261531 DDX54Q8TDD1 881 aaKnown RBP12.07□□□□□ -0.48
SNW1-201ENST00000261531 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
SNW1-201ENST00000261531 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
SNW1-201ENST00000261531 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
SNW1-201ENST00000261531 NCAPD2Q15021 1401 aa12.06□□□□□ -0.48
SNW1-201ENST00000261531 TNS2Q63HR2 1409 aa12.06□□□□□ -0.48
SNW1-201ENST00000261531 SULT6B1Q6IMI4 303 aa12.06□□□□□ -0.48
SNW1-201ENST00000261531 OVOS2A0A0G2JMS6 1433 aa12.05□□□□□ -0.48
SNW1-201ENST00000261531 MS4A1P11836 297 aa12.05□□□□□ -0.48
SNW1-201ENST00000261531 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
SNW1-201ENST00000261531 U2SURPO15042 1029 aaKnown RBP12.05□□□□□ -0.48
SNW1-201ENST00000261531 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
SNW1-201ENST00000261531 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
SNW1-201ENST00000261531 TRIM37O94972 964 aa12.03□□□□□ -0.48
SNW1-201ENST00000261531 HMOX1P09601 288 aa12.03□□□□□ -0.48
SNW1-201ENST00000261531 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
SNW1-201ENST00000261531 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
SNW1-201ENST00000261531 RGPD1P0DJD0 1748 aa12.02□□□□□ -0.48
SNW1-201ENST00000261531 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.48
SNW1-201ENST00000261531 SPG7Q9UQ90 795 aa12.02□□□□□ -0.48
SNW1-201ENST00000261531 KDRP35968 1356 aa12.02□□□□□ -0.49
SNW1-201ENST00000261531 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
SNW1-201ENST00000261531 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
SNW1-201ENST00000261531 CYP27B1O15528 508 aa12.01□□□□□ -0.49
SNW1-201ENST00000261531 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
SNW1-201ENST00000261531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■□□□ 13
SNW1-201ENST00000261531 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
SNW1-201ENST00000261531 BCL9O00512 1426 aa12□□□□□ -0.49
SNW1-201ENST00000261531 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
SNW1-201ENST00000261531 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
SNW1-201ENST00000261531 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
SNW1-201ENST00000261531 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
SNW1-201ENST00000261531 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
SNW1-201ENST00000261531 KCNQ2O43526 872 aa11.99□□□□□ -0.49
SNW1-201ENST00000261531 APBA3O96018 575 aa11.99□□□□□ -0.49
SNW1-201ENST00000261531 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
SNW1-201ENST00000261531 DEFB132Q7Z7B7 95 aa11.99□□□□□ -0.49
SNW1-201ENST00000261531 IPO9Q96P70 1041 aaKnown RBP11.99□□□□□ -0.49
SNW1-201ENST00000261531 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
SNW1-201ENST00000261531 EXOC6Q8TAG9 804 aa11.99□□□□□ -0.49
SNW1-201ENST00000261531 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
SNW1-201ENST00000261531 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
SNW1-201ENST00000261531 WDR43Q15061 677 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNW1-201ENST00000261531 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
SNW1-201ENST00000261531 SBF2Q86WG5 1849 aa11.98□□□□□ -0.49
SNW1-201ENST00000261531 PHKG2P15735 406 aa11.98□□□□□ -0.49
SNW1-201ENST00000261531 BAG6P46379 1132 aa11.98□□□□□ -0.49
SNW1-201ENST00000261531 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
SNW1-201ENST00000261531 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
SNW1-201ENST00000261531 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
SNW1-201ENST00000261531 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
SNW1-201ENST00000261531 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
SNW1-201ENST00000261531 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
SNW1-201ENST00000261531 PRKAR2BP31323 418 aa11.96□□□□□ -0.49
SNW1-201ENST00000261531 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.96□□□□□ -0.49
SNW1-201ENST00000261531 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
SNW1-201ENST00000261531 FCHSD2O94868 740 aa11.96□□□□□ -0.5
SNW1-201ENST00000261531 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.5
SNW1-201ENST00000261531 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.5
SNW1-201ENST00000261531 TNS1Q9HBL0 1735 aaKnown RBP11.96□□□□□ -0.5
SNW1-201ENST00000261531 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
SNW1-201ENST00000261531 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
SNW1-201ENST00000261531 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
SNW1-201ENST00000261531 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
SNW1-201ENST00000261531 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
SNW1-201ENST00000261531 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
SNW1-201ENST00000261531 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
SNW1-201ENST00000261531 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
SNW1-201ENST00000261531 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
SNW1-201ENST00000261531 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
SNW1-201ENST00000261531 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
SNW1-201ENST00000261531 TRMT2AQ8IZ69 625 aaKnown RBP11.94□□□□□ -0.5
SNW1-201ENST00000261531 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
SNW1-201ENST00000261531 PLSCR1O15162 318 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms