RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
TMCC3-201ENST00000261226 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
TMCC3-201ENST00000261226 ZHX1Q9UKY1 873 aaPredicted RBP16.72■□□□□ 0.27
TMCC3-201ENST00000261226 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
TMCC3-201ENST00000261226 TSPYL1Q9H0U9 437 aa16.72■□□□□ 0.27
TMCC3-201ENST00000261226 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
TMCC3-201ENST00000261226 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
TMCC3-201ENST00000261226 MTMR7Q9Y216 660 aa16.72■□□□□ 0.27
TMCC3-201ENST00000261226 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
TMCC3-201ENST00000261226 MCM5P33992 734 aa16.71■□□□□ 0.27
TMCC3-201ENST00000261226 ERLIN1O75477 346 aa16.71■□□□□ 0.27
TMCC3-201ENST00000261226 ADCY5O95622 1261 aa16.71■□□□□ 0.27
TMCC3-201ENST00000261226 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
TMCC3-201ENST00000261226 MCM10Q7L590 875 aa16.71■□□□□ 0.27
TMCC3-201ENST00000261226 C16orf45Q96MC5 204 aaPredicted RBP16.71■□□□□ 0.27
TMCC3-201ENST00000261226 RDXP35241 583 aaKnown RBP16.71■□□□□ 0.26
TMCC3-201ENST00000261226 LARP6Q9BRS8 491 aaKnown RBP16.71■□□□□ 0.26
TMCC3-201ENST00000261226 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
TMCC3-201ENST00000261226 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
TMCC3-201ENST00000261226 ATAD2Q6PL18 1390 aa16.7■□□□□ 0.26
TMCC3-201ENST00000261226 ABCC11Q96J66 1382 aa16.7■□□□□ 0.26
TMCC3-201ENST00000261226 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
TMCC3-201ENST00000261226 EIF3JO75822 258 aaKnown RBP16.7■□□□□ 0.26
TMCC3-201ENST00000261226 TNNT1P13805 278 aa16.7■□□□□ 0.26
TMCC3-201ENST00000261226 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
TMCC3-201ENST00000261226 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
TMCC3-201ENST00000261226 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
TMCC3-201ENST00000261226 PDIA4P13667 645 aaKnown RBP16.69■□□□□ 0.26
TMCC3-201ENST00000261226 TMCO3Q6UWJ1 677 aa16.69■□□□□ 0.26
TMCC3-201ENST00000261226 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
TMCC3-201ENST00000261226 EPS15P42566 896 aa16.69■□□□□ 0.26
TMCC3-201ENST00000261226 KIF18AQ8NI77 898 aa16.69■□□□□ 0.26
TMCC3-201ENST00000261226 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
TMCC3-201ENST00000261226 SFPQP23246 707 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMCC3-201ENST00000261226 KRT32Q14532 448 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
TMCC3-201ENST00000261226 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 F6X3S4 739 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 NESP48681 1621 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
TMCC3-201ENST00000261226 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
TMCC3-201ENST00000261226 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
TMCC3-201ENST00000261226 SMTNL1A8MU46 457 aa16.67■□□□□ 0.26
TMCC3-201ENST00000261226 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
TMCC3-201ENST00000261226 ZNHIT6Q9NWK9 470 aaKnown RBP16.67■□□□□ 0.26
TMCC3-201ENST00000261226 LIMCH1Q9UPQ0 1083 aa16.67■□□□□ 0.26
TMCC3-201ENST00000261226 CCDC102AQ96A19 550 aa16.67■□□□□ 0.26
TMCC3-201ENST00000261226 TRMT1Q9NXH9 659 aaKnown RBP16.67■□□□□ 0.26
TMCC3-201ENST00000261226 KIF2AO00139 706 aaPredicted RBP16.67■□□□□ 0.26
TMCC3-201ENST00000261226 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
TMCC3-201ENST00000261226 TXLNAP40222 546 aa16.66■□□□□ 0.26
TMCC3-201ENST00000261226 LRSAM1Q6UWE0 723 aa16.66■□□□□ 0.26
TMCC3-201ENST00000261226 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
TMCC3-201ENST00000261226 CGNQ9P2M7 1197 aaKnown RBP16.66■□□□□ 0.26
TMCC3-201ENST00000261226 MYL6BP14649 208 aa16.66■□□□□ 0.26
TMCC3-201ENST00000261226 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
TMCC3-201ENST00000261226 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
TMCC3-201ENST00000261226 HDAC1Q13547 482 aaPredicted RBP16.65■□□□□ 0.26
TMCC3-201ENST00000261226 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
TMCC3-201ENST00000261226 SEC24BO95487 1268 aa16.65■□□□□ 0.26
TMCC3-201ENST00000261226 FAM193AP78312 1265 aa16.65■□□□□ 0.26
TMCC3-201ENST00000261226 NUCB1Q02818 461 aa16.65■□□□□ 0.26
TMCC3-201ENST00000261226 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
TMCC3-201ENST00000261226 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
TMCC3-201ENST00000261226 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
TMCC3-201ENST00000261226 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
TMCC3-201ENST00000261226 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
TMCC3-201ENST00000261226 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
TMCC3-201ENST00000261226 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
TMCC3-201ENST00000261226 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
TMCC3-201ENST00000261226 CT47A1Q5JQC4 288 aaPredicted RBP16.64■□□□□ 0.25
TMCC3-201ENST00000261226 TTC22Q5TAA0 569 aa16.64■□□□□ 0.25
TMCC3-201ENST00000261226 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
TMCC3-201ENST00000261226 STX6O43752 255 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
TMCC3-201ENST00000261226 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 KIAA0754O94854 1291 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMCC3-201ENST00000261226 TCEAL9Q9UHQ7 104 aa16.63■□□□□ 0.25
TMCC3-201ENST00000261226 SLC52A1Q9NWF4 448 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 CCDC181Q5TID7 509 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 ARHGAP29Q52LW3 1261 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 CCDC69A6NI79 296 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 TMX3Q96JJ7 454 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 CCDC141Q6ZP82 1450 aa16.62■□□□□ 0.25
TMCC3-201ENST00000261226 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
TMCC3-201ENST00000261226 NUP133Q8WUM0 1156 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms