RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
TRA2B-201ENST00000259043 SCARF2Q96GP6 870 aaPredicted RBP10.86□□□□□ -0.67
TRA2B-201ENST00000259043 IGHA1P01876 353 aa10.85□□□□□ -0.67
TRA2B-201ENST00000259043 FOXD4L5Q5VV16 416 aaPredicted RBP10.85□□□□□ -0.67
TRA2B-201ENST00000259043 LILRA1O75019 489 aa10.84□□□□□ -0.67
TRA2B-201ENST00000259043 PTGIRP43119 386 aa10.84□□□□□ -0.67
TRA2B-201ENST00000259043 RAB15P59190 212 aa10.84□□□□□ -0.67
TRA2B-201ENST00000259043 SRSF11Q05519 484 aaKnown RBP10.84□□□□□ -0.67
TRA2B-201ENST00000259043 ERVH48-1M5A8F1 160 aa10.83□□□□□ -0.68
TRA2B-201ENST00000259043 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
TRA2B-201ENST00000259043 GPAT2Q6NUI2 795 aa10.83□□□□□ -0.68
TRA2B-201ENST00000259043 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.68
TRA2B-201ENST00000259043 FOXK2Q01167 660 aa10.82□□□□□ -0.68
TRA2B-201ENST00000259043 LYPD4Q6UWN0 246 aa10.82□□□□□ -0.68
TRA2B-201ENST00000259043 LYSMD3Q7Z3D4 306 aa10.82□□□□□ -0.68
TRA2B-201ENST00000259043 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
TRA2B-201ENST00000259043 NDUFB9Q9Y6M9 179 aa10.82□□□□□ -0.68
TRA2B-201ENST00000259043 FBXO45P0C2W1 286 aa10.81□□□□□ -0.68
TRA2B-201ENST00000259043 MAP3K10Q02779 954 aa10.81□□□□□ -0.68
TRA2B-201ENST00000259043 TMEM132AQ24JP5 1023 aa10.81□□□□□ -0.68
TRA2B-201ENST00000259043 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
TRA2B-201ENST00000259043 ESPNB1AK53 854 aa10.8□□□□□ -0.68
TRA2B-201ENST00000259043 TRIM52Q96A61 297 aa10.8□□□□□ -0.68
TRA2B-201ENST00000259043 GAS6Q14393 721 aa10.79□□□□□ -0.68
TRA2B-201ENST00000259043 MCM6Q14566 821 aa10.79□□□□□ -0.68
TRA2B-201ENST00000259043 CUEDC1Q9NWM3 386 aaPredicted RBP10.79□□□□□ -0.68
TRA2B-201ENST00000259043 CELA2BP08218 269 aaPredicted RBP10.78□□□□□ -0.68
TRA2B-201ENST00000259043 RNF144AP50876 292 aaPredicted RBP10.78□□□□□ -0.68
TRA2B-201ENST00000259043 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
TRA2B-201ENST00000259043 GMCL1Q96IK5 515 aa10.78□□□□□ -0.68
TRA2B-201ENST00000259043 ENAMQ9NRM1 1142 aa10.78□□□□□ -0.68
TRA2B-201ENST00000259043 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
TRA2B-201ENST00000259043 APBB1O00213 710 aa10.77□□□□□ -0.69
TRA2B-201ENST00000259043 PRICKLE2Q7Z3G6 844 aa10.76□□□□□ -0.69
TRA2B-201ENST00000259043 NR1H3Q13133 447 aa10.75□□□□□ -0.69
TRA2B-201ENST00000259043 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
TRA2B-201ENST00000259043 IRF5Q13568 498 aa10.74□□□□□ -0.69
TRA2B-201ENST00000259043 FOXR1Q6PIV2 292 aa10.74□□□□□ -0.69
TRA2B-201ENST00000259043 TRIM22Q8IYM9 498 aa10.74□□□□□ -0.69
TRA2B-201ENST00000259043 ZNF837Q96EG3 531 aaPredicted RBP10.74□□□□□ -0.69
TRA2B-201ENST00000259043 MBIPQ9NS73 344 aa10.74□□□□□ -0.69
TRA2B-201ENST00000259043 RHOQP17081 205 aa10.73□□□□□ -0.69
TRA2B-201ENST00000259043 GPC1P35052 558 aa10.72□□□□□ -0.69
TRA2B-201ENST00000259043 ATP5J2-PTCD1G3V325 749 aa10.71□□□□□ -0.69
TRA2B-201ENST00000259043 IGF1RP08069 1367 aa10.7□□□□□ -0.7
TRA2B-201ENST00000259043 PHF20L1A8MW92 1017 aa10.7□□□□□ -0.7
TRA2B-201ENST00000259043 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
TRA2B-201ENST00000259043 PCDHB9Q9Y5E1 797 aa10.7□□□□□ -0.7
TRA2B-201ENST00000259043 GPR25O00155 361 aa10.69□□□□□ -0.7
TRA2B-201ENST00000259043 DBN1Q16643 649 aa10.69□□□□□ -0.7
TRA2B-201ENST00000259043 RIPOR1Q6ZS17 1223 aa10.69□□□□□ -0.7
TRA2B-201ENST00000259043 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
TRA2B-201ENST00000259043 DYRK1BQ9Y463 629 aa10.69□□□□□ -0.7
TRA2B-201ENST00000259043 H7C1W4 665 aa10.68□□□□□ -0.7
TRA2B-201ENST00000259043 MEN1O00255 615 aa10.67□□□□□ -0.7
TRA2B-201ENST00000259043 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-201ENST00000259043 BCRP11274 1271 aa10.67□□□□□ -0.7
TRA2B-201ENST00000259043 BEND7Q8N7W2 519 aaPredicted RBP10.67□□□□□ -0.7
TRA2B-201ENST00000259043 PRM3Q9NNZ6 103 aa10.67□□□□□ -0.7
TRA2B-201ENST00000259043 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
TRA2B-201ENST00000259043 CNTNAP5Q8WYK1 1306 aa10.66□□□□□ -0.7
TRA2B-201ENST00000259043 A0A1W2PRU2 124 aa10.66□□□□□ -0.7
TRA2B-201ENST00000259043 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
TRA2B-201ENST00000259043 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
TRA2B-201ENST00000259043 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
TRA2B-201ENST00000259043 MSTNO14793 375 aa10.65□□□□□ -0.7
TRA2B-201ENST00000259043 PLA2G4EQ3MJ16 856 aa10.65□□□□□ -0.7
TRA2B-201ENST00000259043 NEDD1Q8NHV4 660 aa10.65□□□□□ -0.7
TRA2B-201ENST00000259043 GTPBP3Q969Y2 492 aaKnown RBP10.65□□□□□ -0.7
TRA2B-201ENST00000259043 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
TRA2B-201ENST00000259043 LRRC4BQ9NT99 713 aa10.65□□□□□ -0.7
TRA2B-201ENST00000259043 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
TRA2B-201ENST00000259043 POU4F2Q12837 409 aa10.64□□□□□ -0.71
TRA2B-201ENST00000259043 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
TRA2B-201ENST00000259043 GAS2L1Q99501 681 aaPredicted RBP10.64□□□□□ -0.71
TRA2B-201ENST00000259043 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
TRA2B-201ENST00000259043 ABL2P42684 1182 aa10.63□□□□□ -0.71
TRA2B-201ENST00000259043 FLIIQ13045 1269 aa10.63□□□□□ -0.71
TRA2B-201ENST00000259043 SLC27A3Q5K4L6 730 aa10.63□□□□□ -0.71
TRA2B-201ENST00000259043 ACDQ96AP0 544 aa10.63□□□□□ -0.71
TRA2B-201ENST00000259043 POM121Q96HA1 1249 aa10.63□□□□□ -0.71
TRA2B-201ENST00000259043 NLRP3Q96P20 1036 aa10.63□□□□□ -0.71
TRA2B-201ENST00000259043 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
TRA2B-201ENST00000259043 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
TRA2B-201ENST00000259043 ZNF592Q92610 1267 aa10.62□□□□□ -0.71
TRA2B-201ENST00000259043 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
TRA2B-201ENST00000259043 MX2P20592 715 aa10.61□□□□□ -0.71
TRA2B-201ENST00000259043 WDR44Q5JSH3 913 aa10.61□□□□□ -0.71
TRA2B-201ENST00000259043 GRIP2Q9C0E4 1043 aa10.61□□□□□ -0.71
TRA2B-201ENST00000259043 CLN3Q13286 438 aa10.6□□□□□ -0.71
TRA2B-201ENST00000259043 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
TRA2B-201ENST00000259043 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
TRA2B-201ENST00000259043 NBPF15Q8N660 670 aa10.6□□□□□ -0.71
TRA2B-201ENST00000259043 SPOCK3Q9BQ16 436 aa10.6□□□□□ -0.71
TRA2B-201ENST00000259043 CEP126Q9P2H0 1117 aa10.6□□□□□ -0.71
TRA2B-201ENST00000259043 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
TRA2B-201ENST00000259043 ADAM23O75077 832 aa10.58□□□□□ -0.72
TRA2B-201ENST00000259043 ITGB2P05107 769 aa10.58□□□□□ -0.72
TRA2B-201ENST00000259043 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRA2B-201ENST00000259043 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms