RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
TGFB3-201ENST00000238682 KIF24Q5T7B8 1368 aa12.47□□□□□ -0.41
TGFB3-201ENST00000238682 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
TGFB3-201ENST00000238682 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
TGFB3-201ENST00000238682 RGL2O15211 777 aa12.46□□□□□ -0.41
TGFB3-201ENST00000238682 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
TGFB3-201ENST00000238682 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
TGFB3-201ENST00000238682 PDE3BQ13370 1112 aa12.46□□□□□ -0.42
TGFB3-201ENST00000238682 SMG6Q86US8 1419 aaKnown RBP12.46□□□□□ -0.42
TGFB3-201ENST00000238682 A0A0G2JS52 829 aa12.44□□□□□ -0.42
TGFB3-201ENST00000238682 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
TGFB3-201ENST00000238682 ZC3H6P61129 1189 aaKnown RBP12.44□□□□□ -0.42
TGFB3-201ENST00000238682 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
TGFB3-201ENST00000238682 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
TGFB3-201ENST00000238682 CHRNA2Q15822 529 aa12.41□□□□□ -0.42
TGFB3-201ENST00000238682 LARP1Q6PKG0 1096 aaKnown RBP12.41□□□□□ -0.42
TGFB3-201ENST00000238682 NBPF14Q5TI25 921 aa12.41□□□□□ -0.42
TGFB3-201ENST00000238682 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.42
TGFB3-201ENST00000238682 FYB1O15117 783 aa12.4□□□□□ -0.42
TGFB3-201ENST00000238682 NEFLP07196 543 aa12.4□□□□□ -0.42
TGFB3-201ENST00000238682 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
TGFB3-201ENST00000238682 MORC1Q86VD1 984 aa12.4□□□□□ -0.42
TGFB3-201ENST00000238682 PLSCR1O15162 318 aa12.4□□□□□ -0.42
TGFB3-201ENST00000238682 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
TGFB3-201ENST00000238682 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
TGFB3-201ENST00000238682 COG3Q96JB2 828 aa12.39□□□□□ -0.43
TGFB3-201ENST00000238682 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
TGFB3-201ENST00000238682 DDB1Q16531 1140 aa12.39□□□□□ -0.43
TGFB3-201ENST00000238682 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
TGFB3-201ENST00000238682 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
TGFB3-201ENST00000238682 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
TGFB3-201ENST00000238682 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
TGFB3-201ENST00000238682 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
TGFB3-201ENST00000238682 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
TGFB3-201ENST00000238682 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
TGFB3-201ENST00000238682 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
TGFB3-201ENST00000238682 LTN1O94822 1766 aa12.36□□□□□ -0.43
TGFB3-201ENST00000238682 ERBB3P21860 1342 aa12.36□□□□□ -0.43
TGFB3-201ENST00000238682 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
TGFB3-201ENST00000238682 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
TGFB3-201ENST00000238682 IP6K1Q92551 441 aa12.36□□□□□ -0.43
TGFB3-201ENST00000238682 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
TGFB3-201ENST00000238682 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
TGFB3-201ENST00000238682 APBA3O96018 575 aa12.34□□□□□ -0.43
TGFB3-201ENST00000238682 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
TGFB3-201ENST00000238682 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
TGFB3-201ENST00000238682 EXOC5O00471 708 aa12.34□□□□□ -0.43
TGFB3-201ENST00000238682 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
TGFB3-201ENST00000238682 IL2RBP14784 551 aa12.33□□□□□ -0.44
TGFB3-201ENST00000238682 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
TGFB3-201ENST00000238682 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
TGFB3-201ENST00000238682 TRIM37O94972 964 aa12.32□□□□□ -0.44
TGFB3-201ENST00000238682 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
TGFB3-201ENST00000238682 QSER1Q2KHR3 1735 aa12.32□□□□□ -0.44
TGFB3-201ENST00000238682 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
TGFB3-201ENST00000238682 NME9Q86XW9 330 aa12.31□□□□□ -0.44
TGFB3-201ENST00000238682 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
TGFB3-201ENST00000238682 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
TGFB3-201ENST00000238682 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
TGFB3-201ENST00000238682 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
TGFB3-201ENST00000238682 PNISRQ8TF01 805 aaKnown RBP12.3□□□□□ -0.44
TGFB3-201ENST00000238682 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
TGFB3-201ENST00000238682 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
TGFB3-201ENST00000238682 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
TGFB3-201ENST00000238682 FLT4P35916 1363 aa12.3□□□□□ -0.44
TGFB3-201ENST00000238682 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
TGFB3-201ENST00000238682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
TGFB3-201ENST00000238682 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
TGFB3-201ENST00000238682 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
TGFB3-201ENST00000238682 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
TGFB3-201ENST00000238682 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
TGFB3-201ENST00000238682 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
TGFB3-201ENST00000238682 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
TGFB3-201ENST00000238682 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
TGFB3-201ENST00000238682 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
TGFB3-201ENST00000238682 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
TGFB3-201ENST00000238682 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
TGFB3-201ENST00000238682 CNGB1Q14028 1251 aaPredicted RBP12.27□□□□□ -0.45
TGFB3-201ENST00000238682 KCTD17Q8N5Z5 321 aa12.27□□□□□ -0.45
TGFB3-201ENST00000238682 MTHFSP49914 203 aa12.27□□□□□ -0.45
TGFB3-201ENST00000238682 WDR43Q15061 677 aaKnown RBP eCLIP12.27□□□□□ -0.45
TGFB3-201ENST00000238682 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
TGFB3-201ENST00000238682 RAD21O60216 631 aa12.26□□□□□ -0.45
TGFB3-201ENST00000238682 HOXC9P31274 260 aa12.26□□□□□ -0.45
TGFB3-201ENST00000238682 STK32BQ9NY57 414 aa12.26□□□□□ -0.45
TGFB3-201ENST00000238682 MTMR7Q9Y216 660 aa12.26□□□□□ -0.45
TGFB3-201ENST00000238682 AMPHP49418 695 aa12.26□□□□□ -0.45
TGFB3-201ENST00000238682 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
TGFB3-201ENST00000238682 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
TGFB3-201ENST00000238682 SPON1Q9HCB6 807 aa12.25□□□□□ -0.45
TGFB3-201ENST00000238682 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
TGFB3-201ENST00000238682 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
TGFB3-201ENST00000238682 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
TGFB3-201ENST00000238682 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
TGFB3-201ENST00000238682 KCNQ2O43526 872 aa12.24□□□□□ -0.45
TGFB3-201ENST00000238682 R3HDM1Q15032 1099 aaKnown RBP12.24□□□□□ -0.45
TGFB3-201ENST00000238682 CCDC184Q52MB2 194 aa12.24□□□□□ -0.45
TGFB3-201ENST00000238682 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
TGFB3-201ENST00000238682 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
TGFB3-201ENST00000238682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms