RNA–Protein interactions for RNA: ENST00000234453.9

PLEKHA3-201, Transcript of pleckstrin homology domain containing A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLEKHA3, Length 13,880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHA3-201ENST00000234453 TAF4BQ92750 862 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 CARMIL2Q6F5E8 1435 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 ADCY5O95622 1261 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 ZNF397Q8NF99 534 aaPredicted RBP11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 FYB1O15117 783 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 SPECC1LQ69YQ0 1117 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
PLEKHA3-201ENST00000234453 DIAPH1O60610 1272 aaKnown RBP11.9□□□□□ -0.51
PLEKHA3-201ENST00000234453 GSDMDP57764 484 aa11.9□□□□□ -0.51
PLEKHA3-201ENST00000234453 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 CEP57Q86XR8 500 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 LIG1P18858 919 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 TRAK1Q9UPV9 953 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 GNAI1P63096 354 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 NAA25Q14CX7 972 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 WASHC2AQ641Q2 1341 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 C10orf67Q8IYJ2 551 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 BCCIPQ9P287 314 aaKnown RBP eCLIP11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 A0A1B0GUA9 196 aa11.89□□□□□ -0.51
PLEKHA3-201ENST00000234453 TANGO6Q9C0B7 1094 aa11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 V9GYY5 206 aaPredicted RBP11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 NUTM2DQ5VT03 806 aaPredicted RBP11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 GABPB1Q06547 395 aaPredicted RBP11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 ANKS4BQ8N8V4 417 aa11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 CAPN2P17655 700 aa11.88□□□□□ -0.51
PLEKHA3-201ENST00000234453 SNW1Q13573 536 aaKnown RBP11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 MICAL3Q7RTP6 2002 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 URI1O94763 535 aaPredicted RBP11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 LRCH2Q5VUJ6 765 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 SCAPERQ9BY12 1400 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 SPA17Q15506 151 aa11.87□□□□□ -0.51
PLEKHA3-201ENST00000234453 MROH2BQ7Z745 1585 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 GCOM1H8Y6P7 765 aaPredicted RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 KIF3BO15066 747 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 MYZAPP0CAP1 466 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 TRMT1Q9NXH9 659 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 STAMBPO95630 424 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 SRRTQ9BXP5 876 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 CAVIN2O95810 425 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 PANK2Q9BZ23 570 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 CASTP20810 708 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 MYO18AQ92614 2054 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 GOLGA6L9A6NEM1 432 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 SCLT1Q96NL6 688 aa11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 NOB1Q9ULX3 412 aaKnown RBP11.86□□□□□ -0.51
PLEKHA3-201ENST00000234453 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 EBAG9O00559 213 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 ZSCAN23Q3MJ62 389 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 CDKL5O76039 1030 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 MRVI1Q9Y6F6 885 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 CCDC121Q6ZUS5 278 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 CHD1LQ86WJ1 897 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 CEP112Q8N8E3 955 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 ERC1Q8IUD2 1116 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 PPM1EQ8WY54 764 aa11.85□□□□□ -0.51
PLEKHA3-201ENST00000234453 FAM114A1Q8IWE2 563 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 SLC3A2P08195 630 aaKnown RBP11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 KIF4BQ2VIQ3 1234 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 HMOX1P09601 288 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 MAP2K2P36507 400 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 ZKSCAN5Q9Y2L8 839 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 TMX1Q9H3N1 280 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 GOLIM4O00461 696 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 NUMA1Q14980 2115 aa11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 CLNS1AP54105 237 aaKnown RBP11.84□□□□□ -0.51
PLEKHA3-201ENST00000234453 GNAI2P04899 355 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 TERF1P54274 439 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 PAF1Q8N7H5 531 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 CFAP57Q96MR6 1250 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
PLEKHA3-201ENST00000234453 KLHL40Q2TBA0 621 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 317.7 ms