RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CENPQQ7L2Z9 268 aaPredicted RBP6.94□□□□□ -1.3
RFX4-201ENST00000229387 KDM5DQ9BY66 1539 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 CHMP5Q9NZZ3 219 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 SGSM3Q96HU1 749 aa6.93□□□□□ -1.3
RFX4-201ENST00000229387 CRBNQ96SW2 442 aa6.93□□□□□ -1.3
RFX4-201ENST00000229387 UPF2Q9HAU5 1272 aaKnown RBP6.93□□□□□ -1.3
RFX4-201ENST00000229387 CABP2Q9NPB3 220 aa6.93□□□□□ -1.3
RFX4-201ENST00000229387 NLRP1Q9C000 1473 aa6.93□□□□□ -1.3
RFX4-201ENST00000229387 BRD4O60885 1362 aaPredicted RBP6.93□□□□□ -1.3
RFX4-201ENST00000229387 ZNF853P0CG23 659 aa6.93□□□□□ -1.3
RFX4-201ENST00000229387 PROSER2Q86WR7 435 aaPredicted RBP6.92□□□□□ -1.3
RFX4-201ENST00000229387 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 ZCCHC11Q5TAX3 1644 aaKnown RBP6.92□□□□□ -1.3
RFX4-201ENST00000229387 ARHGEF5Q12774 1597 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 SYCP1Q15431 976 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 MORC2Q9Y6X9 1032 aaPredicted RBP6.92□□□□□ -1.3
RFX4-201ENST00000229387 MAGI2Q86UL8 1455 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 PARD3Q8TEW0 1356 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 CCDC189A1A4V9 331 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 A6NJR5 290 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 KIF3CO14782 793 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 PYGBP11216 843 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 SWT1Q5T5J6 900 aaKnown RBP6.92□□□□□ -1.3
RFX4-201ENST00000229387 SLKQ9H2G2 1235 aaPredicted RBP6.92□□□□□ -1.3
RFX4-201ENST00000229387 RSPH14Q9UHP6 348 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 WDR7Q9Y4E6 1490 aa6.92□□□□□ -1.3
RFX4-201ENST00000229387 DUOX2Q9NRD8 1548 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 CALRP27797 417 aaKnown RBP6.91□□□□□ -1.3
RFX4-201ENST00000229387 ITFG2Q969R8 447 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 RASSF4Q9H2L5 321 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 ARHGAP31Q2M1Z3 1444 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 ATP10AO60312 1499 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 GSCP56915 257 aaPredicted RBP6.91□□□□□ -1.3
RFX4-201ENST00000229387 BORCS6Q96GS4 357 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 POLR1AO95602 1720 aaPredicted RBP6.91□□□□□ -1.3
RFX4-201ENST00000229387 MINK1Q8N4C8 1332 aaPredicted RBP6.91□□□□□ -1.3
RFX4-201ENST00000229387 NUTM2FA1L443 756 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 SMARCA5O60264 1052 aaPredicted RBP6.91□□□□□ -1.3
RFX4-201ENST00000229387 BCAR3O75815 825 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 FAM69CQ0P6D2 419 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 NOS1P29475 1434 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 CD109Q6YHK3 1445 aa6.91□□□□□ -1.3
RFX4-201ENST00000229387 PPP1R12AO14974 1030 aaPredicted RBP6.9□□□□□ -1.3
RFX4-201ENST00000229387 SRPK2P78362 688 aaKnown RBP6.9□□□□□ -1.3
RFX4-201ENST00000229387 TRDNQ13061 729 aa6.9□□□□□ -1.3
RFX4-201ENST00000229387 IDI1Q13907 227 aa6.9□□□□□ -1.3
RFX4-201ENST00000229387 C11orf91Q3C1V1 193 aa6.9□□□□□ -1.3
RFX4-201ENST00000229387 BCL2L12Q9HB09 334 aa6.9□□□□□ -1.3
RFX4-201ENST00000229387 ABCB7O75027 752 aa6.9□□□□□ -1.31
RFX4-201ENST00000229387 MORC1Q86VD1 984 aa6.9□□□□□ -1.31
RFX4-201ENST00000229387 PARP9Q8IXQ6 854 aa6.9□□□□□ -1.31
RFX4-201ENST00000229387 FAM210AQ96ND0 272 aa6.9□□□□□ -1.31
RFX4-201ENST00000229387 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.31
RFX4-201ENST00000229387 LRPPRCP42704 1394 aaKnown RBP6.9□□□□□ -1.31
RFX4-201ENST00000229387 PLEKHH1Q9ULM0 1364 aa6.9□□□□□ -1.31
RFX4-201ENST00000229387 KLHL33A6NCF5 533 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 CTIFO43310 598 aaKnown RBP6.89□□□□□ -1.31
RFX4-201ENST00000229387 TDO2P48775 406 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 RPAINQ86UA6 219 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 NPC1L1Q9UHC9 1359 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 ABCC1P33527 1531 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 U2AF2P26368 475 aaKnown RBP eCLIP6.89□□□□□ -1.31
RFX4-201ENST00000229387 NUBP1P53384 320 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 GGNBP2Q9H3C7 697 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 ZMYM3Q14202 1370 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
RFX4-201ENST00000229387 GPRASP1Q5JY77 1395 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 RAD51AP2Q09MP3 1159 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
RFX4-201ENST00000229387 MPNDQ8N594 471 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 FAM53CQ9NYF3 392 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 MYO5CQ9NQX4 1742 aa6.89□□□□□ -1.31
RFX4-201ENST00000229387 U2SURPO15042 1029 aaKnown RBP6.88□□□□□ -1.31
RFX4-201ENST00000229387 KIAA2012Q0VF49 1180 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 PDE3BQ13370 1112 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
RFX4-201ENST00000229387 ZNF445P59923 1031 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 CTNNA3Q9UI47 895 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 SUFUQ9UMX1 484 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 REC8O95072 547 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 CASQ1P31415 396 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 MTHFSP49914 203 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 GOLGA2Q08379 1002 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 MTA1Q13330 715 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 CDCA8Q53HL2 280 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 JMYQ8N9B5 988 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
RFX4-201ENST00000229387 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 CXorf56Q9H5V9 222 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 TNNQ9UQP3 1299 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 NCOA3Q9Y6Q9 1424 aa6.88□□□□□ -1.31
RFX4-201ENST00000229387 SHROOM2Q13796 1616 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 CLASP1Q7Z460 1538 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 CCDC96Q2M329 555 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 CCDC91Q7Z6B0 441 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 ANKRD23Q86SG2 305 aa6.87□□□□□ -1.31
RFX4-201ENST00000229387 MKL1Q969V6 931 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms