RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 BEND7Q8N7W2 519 aaPredicted RBP7.14□□□□□ -1.27
CDKN3-201ENST00000216414 GALNT6Q8NCL4 622 aa7.14□□□□□ -1.27
CDKN3-201ENST00000216414 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
CDKN3-201ENST00000216414 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
CDKN3-201ENST00000216414 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
CDKN3-201ENST00000216414 SENP3-EIF4A1A0A087X0R7 540 aa7.12□□□□□ -1.27
CDKN3-201ENST00000216414 PTGIRP43119 386 aa7.12□□□□□ -1.27
CDKN3-201ENST00000216414 LYSMD3Q7Z3D4 306 aa7.12□□□□□ -1.27
CDKN3-201ENST00000216414 DCAF5Q96JK2 942 aa7.12□□□□□ -1.27
CDKN3-201ENST00000216414 LILRA1O75019 489 aa7.11□□□□□ -1.27
CDKN3-201ENST00000216414 RFC5P40937 340 aa7.11□□□□□ -1.27
CDKN3-201ENST00000216414 NEDD1Q8NHV4 660 aa7.11□□□□□ -1.27
CDKN3-201ENST00000216414 CYLDQ9NQC7 956 aa7.11□□□□□ -1.27
CDKN3-201ENST00000216414 CNTNAP5Q8WYK1 1306 aa7.1□□□□□ -1.27
CDKN3-201ENST00000216414 PRICKLE2Q7Z3G6 844 aa7.1□□□□□ -1.27
CDKN3-201ENST00000216414 ESPNB1AK53 854 aa7.09□□□□□ -1.27
CDKN3-201ENST00000216414 RHOQP17081 205 aa7.09□□□□□ -1.27
CDKN3-201ENST00000216414 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
CDKN3-201ENST00000216414 KDF1Q8NAX2 398 aaPredicted RBP7.09□□□□□ -1.27
CDKN3-201ENST00000216414 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
CDKN3-201ENST00000216414 CUEDC1Q9NWM3 386 aaPredicted RBP7.08□□□□□ -1.28
CDKN3-201ENST00000216414 PCDHB9Q9Y5E1 797 aa7.08□□□□□ -1.28
CDKN3-201ENST00000216414 ATP5J2-PTCD1G3V325 749 aa7.07□□□□□ -1.28
CDKN3-201ENST00000216414 K7ELQ4 463 aaPredicted RBP7.07□□□□□ -1.28
CDKN3-201ENST00000216414 MEN1O00255 615 aa7.07□□□□□ -1.28
CDKN3-201ENST00000216414 TRIM52Q96A61 297 aa7.07□□□□□ -1.28
CDKN3-201ENST00000216414 GMCL1Q96IK5 515 aa7.07□□□□□ -1.28
CDKN3-201ENST00000216414 MBIPQ9NS73 344 aa7.07□□□□□ -1.28
CDKN3-201ENST00000216414 BCRP11274 1271 aa7.06□□□□□ -1.28
CDKN3-201ENST00000216414 GAS6Q14393 721 aa7.06□□□□□ -1.28
CDKN3-201ENST00000216414 TRIM34Q9BYJ4 488 aa7.06□□□□□ -1.28
CDKN3-201ENST00000216414 ZBBXA8MT70 800 aa7.05□□□□□ -1.28
CDKN3-201ENST00000216414 GIGYF1O75420 1035 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-201ENST00000216414 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-201ENST00000216414 RIPOR1Q6ZS17 1223 aa7.05□□□□□ -1.28
CDKN3-201ENST00000216414 PCMTD1Q96MG8 357 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-201ENST00000216414 GPR25O00155 361 aa7.04□□□□□ -1.28
CDKN3-201ENST00000216414 PROCP04070 461 aa7.04□□□□□ -1.28
CDKN3-201ENST00000216414 ZNF837Q96EG3 531 aaPredicted RBP7.04□□□□□ -1.28
CDKN3-201ENST00000216414 IGF1RP08069 1367 aa7.04□□□□□ -1.28
CDKN3-201ENST00000216414 TMEM259Q4ZIN3 620 aa7.03□□□□□ -1.28
CDKN3-201ENST00000216414 SLC27A3Q5K4L6 730 aa7.03□□□□□ -1.28
CDKN3-201ENST00000216414 GAS2L1Q99501 681 aaPredicted RBP7.03□□□□□ -1.28
CDKN3-201ENST00000216414 NSFL1CQ9UNZ2 370 aaKnown RBP7.03□□□□□ -1.28
CDKN3-201ENST00000216414 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 ITGB2P05107 769 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 CC2D2BQ6DHV5 1058 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 TRIM22Q8IYM9 498 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 Q8N3U1 123 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 NLRP3Q96P20 1036 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
CDKN3-201ENST00000216414 GPC1P35052 558 aa7.01□□□□□ -1.29
CDKN3-201ENST00000216414 DBN1Q16643 649 aa7.01□□□□□ -1.29
CDKN3-201ENST00000216414 BAG6P46379 1132 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 ERVK-9P63128 1117 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 POU4F2Q12837 409 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 RNF20Q5VTR2 975 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 TRERF1Q96PN7 1200 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 LRRC4BQ9NT99 713 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 DYRK1BQ9Y463 629 aa7□□□□□ -1.29
CDKN3-201ENST00000216414 H7C1W4 665 aa6.99□□□□□ -1.29
CDKN3-201ENST00000216414 CYP2U1Q7Z449 544 aa6.99□□□□□ -1.29
CDKN3-201ENST00000216414 GTPBP3Q969Y2 492 aaKnown RBP6.99□□□□□ -1.29
CDKN3-201ENST00000216414 GJD4Q96KN9 370 aaPredicted RBP6.99□□□□□ -1.29
CDKN3-201ENST00000216414 ESF1Q9H501 851 aaKnown RBP6.99□□□□□ -1.29
CDKN3-201ENST00000216414 GOPCQ9HD26 462 aa6.99□□□□□ -1.29
CDKN3-201ENST00000216414 SCTRP47872 440 aa6.98□□□□□ -1.29
CDKN3-201ENST00000216414 ALYREFQ86V81 257 aaKnown RBP6.98□□□□□ -1.29
CDKN3-201ENST00000216414 CCDC125Q86Z20 511 aa6.98□□□□□ -1.29
CDKN3-201ENST00000216414 ACDQ96AP0 544 aa6.98□□□□□ -1.29
CDKN3-201ENST00000216414 ARHGEF10LQ9HCE6 1279 aa6.98□□□□□ -1.29
CDKN3-201ENST00000216414 PCDHB11Q9Y5F2 797 aa6.98□□□□□ -1.29
CDKN3-201ENST00000216414 MX2P20592 715 aa6.97□□□□□ -1.29
CDKN3-201ENST00000216414 NR1H3Q13133 447 aa6.97□□□□□ -1.29
CDKN3-201ENST00000216414 NBPF10Q6P3W6 841 aaKnown RBP6.97□□□□□ -1.29
CDKN3-201ENST00000216414 NBPF15Q8N660 670 aa6.97□□□□□ -1.29
CDKN3-201ENST00000216414 IL27Q8NEV9 243 aa6.97□□□□□ -1.29
CDKN3-201ENST00000216414 BCANQ96GW7 911 aa6.97□□□□□ -1.29
CDKN3-201ENST00000216414 RAB6BQ9NRW1 208 aa6.97□□□□□ -1.29
CDKN3-201ENST00000216414 ZNF330Q9Y3S2 320 aaPredicted RBP6.97□□□□□ -1.29
CDKN3-201ENST00000216414 FURINP09958 794 aa6.96□□□□□ -1.3
CDKN3-201ENST00000216414 CLN3Q13286 438 aa6.96□□□□□ -1.3
CDKN3-201ENST00000216414 NEUROD2Q15784 382 aa6.96□□□□□ -1.3
CDKN3-201ENST00000216414 GRIP2Q9C0E4 1043 aa6.96□□□□□ -1.3
CDKN3-201ENST00000216414 TIMMDC1Q9NPL8 285 aa6.96□□□□□ -1.3
CDKN3-201ENST00000216414 MKL2Q9ULH7 1088 aa6.96□□□□□ -1.3
CDKN3-201ENST00000216414 WASLO00401 505 aaPredicted RBP6.95□□□□□ -1.3
CDKN3-201ENST00000216414 OIP5O43482 229 aa6.95□□□□□ -1.3
CDKN3-201ENST00000216414 MCCD1P59942 119 aaPredicted RBP6.95□□□□□ -1.3
CDKN3-201ENST00000216414 TAS1R3Q7RTX0 852 aa6.95□□□□□ -1.3
CDKN3-201ENST00000216414 ZNF592Q92610 1267 aa6.95□□□□□ -1.3
CDKN3-201ENST00000216414 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
CDKN3-201ENST00000216414 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
CDKN3-201ENST00000216414 KRBA1A5PL33 1030 aa6.94□□□□□ -1.3
CDKN3-201ENST00000216414 SPATA31C2B4DYI2 1134 aa6.94□□□□□ -1.3
CDKN3-201ENST00000216414 TRAK2O60296 914 aa6.93□□□□□ -1.3
CDKN3-201ENST00000216414 F11P03951 625 aa6.93□□□□□ -1.3
CDKN3-201ENST00000216414 MAP2K3P46734 347 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms