RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.74
SUPT16H-201ENST00000216297 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.75
SUPT16H-201ENST00000216297 SRCIN1Q9C0H9 1055 aa10.4□□□□□ -0.75
SUPT16H-201ENST00000216297 SPAG9O60271 1321 aaKnown RBP10.4□□□□□ -0.75
SUPT16H-201ENST00000216297 TSHZ3Q63HK5 1081 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 CTIFO43310 598 aaKnown RBP10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 RAD51AP2Q09MP3 1159 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 THUMPD2Q9BTF0 503 aaKnown RBP10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 KCNF1Q9H3M0 494 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 HDAC5Q9UQL6 1122 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 SKILP12757 684 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 RNF20Q5VTR2 975 aa10.39□□□□□ -0.75
SUPT16H-201ENST00000216297 NESP48681 1621 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 STX6O43752 255 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 ANO6Q4KMQ2 910 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 ZBTB7BO15156 539 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 FBXO38Q6PIJ6 1188 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 NSD3Q9BZ95 1437 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 FAM177A1Q8N128 213 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 ERO1AQ96HE7 468 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 DRC1Q96MC2 740 aa10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 POLR3AO14802 1390 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-201ENST00000216297 ZSCAN22P10073 491 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 ZNF165P49910 485 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 ARHGAP29Q52LW3 1261 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 SYTL4Q96C24 671 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 FAM135AQ9P2D6 1515 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 TEX2Q8IWB9 1127 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 FEZ2Q9UHY8 353 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 CAPN2P17655 700 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 ERCC6LQ2NKX8 1250 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
SUPT16H-201ENST00000216297 LOC102724159A0A0B4J2E5 919 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 DIAPH1O60610 1272 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 HMOX1P09601 288 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 TYRO3Q06418 890 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 PWP2Q15269 919 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 ZSCAN25Q6NSZ9 544 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 ABCC2Q92887 1545 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 CCDC171Q6TFL3 1326 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 KRT85P78386 507 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 LMOD3Q0VAK6 560 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 CCDC34Q96HJ3 373 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 SYCP1Q15431 976 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 SYT10Q6XYQ8 523 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 SNW1Q13573 536 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 ZSCAN26Q16670 478 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
SUPT16H-201ENST00000216297 URI1O94763 535 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 CTR9Q6PD62 1173 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 INTS4Q96HW7 963 aaKnown RBP10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 FMNL2Q96PY5 1086 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 EFCC1Q9HA90 598 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 CEBPZQ03701 1054 aaKnown RBP10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 PDS5BQ9NTI5 1447 aa10.35□□□□□ -0.75
SUPT16H-201ENST00000216297 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 ABCA10Q8WWZ4 1543 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 WDR7Q9Y4E6 1490 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 SMC2O95347 1197 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 LARP1BQ659C4 914 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 PRKAR2BP31323 418 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 TROQ12816 1431 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 TTC31Q49AM3 519 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 EXOC6BQ9Y2D4 811 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 ABCC11Q96J66 1382 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 F13A1P00488 732 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 DDX54Q8TDD1 881 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 DACT1Q9NYF0 836 aa10.34□□□□□ -0.75
SUPT16H-201ENST00000216297 KIF2AO00139 706 aaPredicted RBP10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 TRIM66O15016 1216 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 SYT1P21579 422 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 GNAI1P63096 354 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 SPATA32Q96LK8 384 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 OS9Q13438 667 aaPredicted RBP10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 A2MP01023 1474 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CASTP20810 708 aaKnown RBP10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CASQ1P31415 396 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms