RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Capn2O08529 700 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Vps18Q8R307 973 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ccdc97Q9DBT3 340 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gm15262A0A140LIQ5 728 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 SelenooQ9DBC0 667 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Tbc1d8Q9Z1A9 1134 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Phlpp2Q8BXA7 1320 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Nbr1P97432 988 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Themis2Q91YX0 663 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Sytl4Q9R0Q1 673 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Kif3bQ61771 747 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Stk26Q99JT2 416 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Eif2aQ8BJW6 581 aaKnown RBP7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Cfap99A0A140LIX9 648 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Hspa4Q61316 841 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Eif2b5Q8CHW4 717 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Q9D9S1 216 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Stac3Q8BZ71 360 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 CarsQ9ER72 831 aaKnown RBP7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Wdr33Q8K4P0 1330 aaKnown RBP7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Fmn1Q05860 1466 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ddx46Q569Z5 1032 aaKnown RBP7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ciz1Q8VEH2 845 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Rbm33Q9CXK9 1231 aaKnown RBP7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Zbtb12Q9Z150 459 aa7.13□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gnl2Q99LH1 728 aaKnown RBP7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Secisbp2lQ6A098 1086 aaKnown RBP7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gm21969J3QJZ1 289 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Basp1Q91XV3 226 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Snw1Q9CSN1 536 aaKnown RBP7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Jakmip1Q8BVL9 626 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Krt85Q9Z2T6 507 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 CenphQ9QYM8 241 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Zbtb22Q9Z0G7 638 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Rps6ka5Q8C050 863 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Bank1Q80VH0 783 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Spag9Q58A65 1321 aaKnown RBP7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Smarcc1P97496 1104 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ccdc47Q9D024 483 aaKnown RBP7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 NacadQ5SWP3 1504 aa7.12□□□□□ -1.27
Ubr4-212ENSMUST00000165860 ClgnP52194 611 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Sh2d4bA6X942 431 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gm18336A0A140LIU8 765 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Pde1cQ64338 706 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Erlin2Q8BFZ9 340 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Bloc1s4Q8VED2 215 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Sem1P60897 70 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Tbc1d9Q3UYK3 1264 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Diaph1O08808 1255 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Rai14Q9EP71 979 aaKnown RBP7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ccdc171E9Q1U1 1324 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Bbof1Q3V079 533 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Fan1Q69ZT1 1020 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ca8P28651 291 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Cplx2P84086 134 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ccdc121E9Q6D3 323 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Apaf1O88879 1249 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Usp16Q99LG0 825 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Armc9Q9D2I5 817 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Stk3Q9JI10 497 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Cep85lA0A1W2P884 806 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 EsrrbQ61539 433 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Cfap73J3QPZ5 306 aa7.11□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Rab3gap2Q8BMG7 1366 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ptgs1P22437 602 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ctage5Q8R311 779 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ube2hP62257 183 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Dnajc8Q6NZB0 253 aaKnown RBP7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Satb2Q8VI24 733 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Anp32cQ64G17 123 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Eif5P59325 429 aaKnown RBP7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ttc21aQ8C0S4 1314 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ehbp1Q69ZW3 1231 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Tubb2aQ7TMM9 445 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Q8C5K5 320 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Tubb2bQ9CWF2 445 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 4930548H24RikQ9D496 437 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Vps8Q0P5W1 1427 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Rnf168Q80XJ2 565 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Dhx29Q6PGC1 1365 aaKnown RBP7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Pus7B7ZNL8 666 aaKnown RBP7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 LnpkQ7TQ95 425 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Krt82Q99M74 516 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Cfap157Q0VFX2 523 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ripk4Q9ERK0 786 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Evc2Q8K1G2 1220 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 HmmrQ00547 794 aaKnown RBP7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ica1lQ3TY65 431 aa7.1□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ddx42Q810A7 929 aaKnown RBP7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 AmotQ8VHG2 1126 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Stk38Q91VJ4 465 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Kif24Q6NWW5 1356 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ess2O70279 479 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gtf2f1Q3THK3 508 aaKnown RBP7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Usp25P57080 1055 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Cep57Q8CEE0 500 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Maco1Q7TQE6 664 aaKnown RBP7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Ccdc93Q7TQK5 629 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Hdgfl1Q2VPR5 283 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Erlin1Q91X78 346 aa7.09□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms