RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Ccdc171E9Q1U1 1324 aa30.21■■■□□ 2.43
Cpsf4-205ENSMUST00000160629 InhbeO08717 350 aa30.21■■■□□ 2.43
Cpsf4-205ENSMUST00000160629 Zranb3Q6NZP1 1069 aa30.21■■■□□ 2.43
Cpsf4-205ENSMUST00000160629 Pard3Q99NH2 1333 aa30.21■■■□□ 2.43
Cpsf4-205ENSMUST00000160629 Nup153E9Q3G8 1462 aaKnown RBP30.2■■■□□ 2.43
Cpsf4-205ENSMUST00000160629 Zpr1Q62384 459 aa30.17■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 ThemisQ8BGW0 636 aa30.17■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 Psrc1Q9D0P7 329 aa30.17■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 Zeb2Q9R0G7 1215 aa30.17■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 Abcc12Q80WJ6 1366 aa30.16■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 Pak3Q61036 559 aa30.14■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 Usp16Q99LG0 825 aa30.14■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 Tnrc6cQ3UHC0 1690 aaKnown RBP30.14■■■□□ 2.42
Cpsf4-205ENSMUST00000160629 4930572O03RikQ8C5Y0 211 aa30.13■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Polr3glQ8R0C0 218 aa30.13■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Cc2d1aQ8K1A6 943 aa30.12■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Mbd3Q9Z2D8 285 aaKnown RBP30.12■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Shank2Q80Z38 1476 aa30.12■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Aox2Q5SGK3 1345 aa30.11■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Trim26Q99PN3 545 aa30.1■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 U2surpQ6NV83 1029 aaKnown RBP30.1■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 NeflP08551 543 aa30.09■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Ccdc60Q8C4J0 545 aa30.08■■■□□ 2.41
Cpsf4-205ENSMUST00000160629 Myo5bP21271 1818 aa30.07■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Snap23O09044 210 aa30.07■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Sf3b2Q3UJB0 878 aaKnown RBP30.06■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Vamp4O70480 141 aa30.05■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Ggnbp2Q5SV77 696 aa30.05■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Tnks1bp1P58871 1720 aa30.05■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Adgrb1Q3UHD1 1582 aa30.04■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Igsf1Q7TQA1 1317 aa30.04■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Cacna1sQ02789 1880 aa30.04■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 G3bp1P97855 465 aaKnown RBP30.04■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Tns2Q8CGB6 1400 aa30.04■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Trim58Q5NCC9 485 aa30.03■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Klhdc4Q921I2 584 aa30.03■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Prim1P20664 417 aa30.02■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Apbb1Q9QXJ1 710 aa30.02■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Sgsm1Q8BPQ7 1093 aa30.02■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Foxp4Q9DBY0 795 aaKnown RBP30.02■■■□□ 2.4
Cpsf4-205ENSMUST00000160629 Gm6268A2A3U9 297 aa30.01■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Cavin2Q63918 418 aaKnown RBP30.01■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Eif3bQ8JZQ9 803 aaKnown RBP30.01■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Chmp7Q8R1T1 451 aa30.01■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Phkg2Q9DB30 406 aa30.01■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Fam50bQ9WTJ8 334 aa30.01■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Pdzd9Q9D9M4 266 aa29.99■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Ltbp1Q8CG19 1712 aa29.99■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Ccdc129Q14B48 1034 aa29.97■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 MpndQ3TV65 487 aa29.97■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 KarsQ99MN1 595 aaKnown RBP29.97■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Fer1l6E0CZ42 1862 aa29.97■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Ssfa2Q922B9 1252 aa29.96■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Kat6bQ8BRB7 1872 aa29.96■■■□□ 2.39
Cpsf4-205ENSMUST00000160629 Plekhm2Q80TQ5 1018 aa29.95■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Speer4bQ9D9F7 267 aa29.93■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 1700019A02RikA0A087WPV9 146 aa29.93■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 AampJ3QN89 436 aa29.91■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Senp3Q9EP97 568 aaKnown RBP29.91■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Csrnp3P59055 597 aa29.91■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Q3TQI7 289 aaKnown RBP29.91■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Btbd11Q6GQW0 1109 aa29.91■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Gm21680A0A0G2JGR8 267 aa29.89■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Pibf1E9Q6K3 756 aa29.89■■■□□ 2.38
Cpsf4-205ENSMUST00000160629 Pm20d1Q8C165 503 aa29.88■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Ginm1Q91WR6 327 aa29.88■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Prkrip1Q9CWV6 186 aaKnown RBP29.88■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Nsd3Q6P2L6 1439 aa29.88■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Atf5O70191 283 aa29.88■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Akap11E9Q777 1895 aa29.87■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Mst1rQ62190 1378 aa29.87■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Kcnh4A2A5F7 1018 aa29.87■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Asic4Q7TNS7 539 aa29.87■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Pank1Q8K4K6 548 aa29.87■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Mast2Q60592 1734 aa29.87■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Chl1P70232 1209 aa29.86■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Tmco5bQ80X59 307 aa29.86■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Elp1Q7TT37 1333 aaKnown RBP29.85■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Msh6P54276 1358 aaKnown RBP29.85■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Slc5a1Q8C3K6 665 aa29.85■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Col22a1E9Q7P1 1613 aa29.84■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Eif4a1P60843 406 aaKnown RBP29.84■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Gm21663A0A0G2JE01 267 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Gm7361D3Z6R1 267 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 5031410I06RikE9Q4E0 267 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Gm1979E9QAN3 267 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Gm5862K7N5V5 267 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Gm10220K7N660 267 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Aldh1l1Q8R0Y6 902 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 Col1a2Q01149 1372 aa29.83■■■□□ 2.37
Cpsf4-205ENSMUST00000160629 MarsQ68FL6 902 aaKnown RBP29.82■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Nkx2-3P97334 362 aa29.81■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Rgs17Q9QZB0 210 aa29.81■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Q3UPC7 1272 aa29.8■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Chpf2Q3UU43 768 aa29.8■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Znf521Q6KAS7 1311 aa29.8■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Ubr2Q6WKZ8 1755 aa29.8■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Vps33bP59016 617 aa29.79■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Larp1Q6ZQ58 1072 aaKnown RBP29.79■■■□□ 2.36
Cpsf4-205ENSMUST00000160629 Ccdc155Q80VJ8 648 aa29.79■■■□□ 2.36
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms