RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Ccdc96Q9CR92 584 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Cyp46a1Q9WVK8 500 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Rtf1A2AQ19 715 aaKnown RBP14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Usp25P57080 1055 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 KinQ8K339 391 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Ccdc34Q3UI66 367 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Mctp2Q5RJH2 878 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Syt10Q9R0N4 523 aa14.7□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 CrebrfQ8CDG5 640 aaKnown RBP14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Nrbp1Q99J45 535 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Smc3Q9CW03 1217 aaKnown RBP14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Tpm1P58771 284 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Ica1lQ3TY65 431 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Puf60Q3UEB3 564 aaKnown RBP14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Cabp4Q8VHC5 271 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Sh3bgrQ9WUZ7 214 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Myom2Q14BI5 1463 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Cavin4A2AMM0 362 aa14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 AnlnQ8K298 1121 aaKnown RBP14.69□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Calcoco2A2A6M5 331 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Ankrd44B2RXR6 993 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Lamc1P02468 1607 aaKnown RBP14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Neo1P97798 1493 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Atp7aQ64430 1491 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Hmox1P14901 289 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Ube2hP62257 183 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Frat1P70339 274 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Oxsr1Q6P9R2 527 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 CtifQ6PEE2 600 aaKnown RBP14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Nlrp3Q8R4B8 1033 aa14.68□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Zscan29E9Q5B4 869 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Zfp597E9Q6S0 419 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Mcm2P97310 904 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 PdcQ9QW08 244 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Supt6hQ62383 1726 aaKnown RBP14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Kdm6bQ5NCY0 1641 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Pof1bQ8K4L4 587 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Hmgn5Q9JL35 406 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 P2rx7Q9Z1M0 595 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Fgd6Q69ZL1 1399 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Brpf3B2KF05 1204 aaKnown RBP14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Zranb1Q7M760 708 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Gcc2Q8CHG3 1679 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Fam177a1Q8BR63 207 aa14.67□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Paxbp1P58501 919 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Cnnm3Q32NY4 713 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Spag5Q7TME2 1165 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Mrps27Q8BK72 415 aaKnown RBP14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Trap1aP19473 224 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Rtel1Q0VGM9 1203 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Pmfbp1Q9WVQ0 1022 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Fam135aQ6NS59 1506 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Nap1l3Q794H2 544 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Pip4k2bQ80XI4 416 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Nup88Q8CEC0 753 aaKnown RBP14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Fbxo3Q9DC63 480 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Stk3Q9JI10 497 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Bcar3Q9QZK2 820 aa14.66□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Tarbp1E9Q368 1579 aa14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Iqca1Q9CUL5 857 aa14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Elp1Q7TT37 1333 aaKnown RBP14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 1700017N19RikA0A087WPJ1 469 aa14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Mctp1E9PV86 951 aa14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Cfap157Q0VFX2 523 aa14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Ccar2Q8VDP4 922 aaKnown RBP14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Usp16Q99LG0 825 aa14.65□□□□□ -0.06
Pcdh1-202ENSMUST00000159405 Rassf4Q8CB96 322 aa14.64□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 TnmdQ9EP64 317 aa14.64□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Vwa3bJ9JI28 736 aa14.64□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Rai14Q9EP71 979 aaKnown RBP14.63□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Zscan22Q8BGS5 496 aa14.63□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Ifi35Q9D8C4 286 aa14.63□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 LlphQ9D945 130 aaKnown RBP14.63□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Bicd2Q921C5 820 aa14.63□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Stx6Q9JKK1 255 aa14.63□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Col17a1Q07563 1470 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Mcm6P97311 821 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Pnpla2Q8BJ56 486 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Mns1Q61884 491 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Q8BT18 775 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Arhgap5P97393 1501 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 TfrcQ62351 763 aaKnown RBP14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Aldh8a1Q8BH00 487 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Prune1Q8BIW1 454 aa14.62□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 IbtkQ6ZPR6 1352 aaKnown RBP14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Ranbp1P34022 203 aaKnown RBP14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Q3TQI7 289 aaKnown RBP14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Ap5z1Q3U829 807 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Tshz1Q5DTH5 1084 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Phf20l1Q8CCJ9 1013 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Cdc37l1Q9CZP7 335 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Slx4ipQ9D7Y9 413 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Ccdc162pQ0VG85 912 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Ggt6Q6PDE7 497 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Ints3Q7TPD0 1041 aaKnown RBP14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Fam13aQ8BGI4 693 aa14.61□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 AU022751B1B0V2 589 aa14.6□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 L1td1Q587J6 782 aaKnown RBP14.6□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Mum1Q6DID5 682 aa14.6□□□□□ -0.07
Pcdh1-202ENSMUST00000159405 Grin2aP35436 1464 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms