RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Abca9Q8K449 1623 aa12.99□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Rnf17Q99MV7 1640 aa12.99□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Kdm5aQ3UXZ9 1690 aa12.99□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Syt10Q9R0N4 523 aa12.98□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Yeats2Q3TUF7 1407 aa12.98□□□□□ -0.33
Rnf41-201ENSMUST00000096386 MycnP03966 462 aaKnown RBP12.98□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Spata32Q8C5V0 334 aa12.98□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Nlrp3Q8R4B8 1033 aa12.98□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Cspp1B2RX88 1205 aa12.97□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Speer4f2E9Q366 295 aa12.97□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Ifi35Q9D8C4 286 aa12.97□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Trpm1Q2TV84 1622 aa12.97□□□□□ -0.33
Rnf41-201ENSMUST00000096386 AnkarA2RT91 1465 aa12.97□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Erich4Q3UNU4 136 aa12.97□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Elp1Q7TT37 1333 aaKnown RBP12.96□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Rab3gap1Q80UJ7 981 aa12.96□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Fam53cQ8BXQ8 393 aa12.96□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Pola1P33609 1465 aa12.96□□□□□ -0.33
Rnf41-201ENSMUST00000096386 Rtel1Q0VGM9 1203 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Kmt5bQ3U8K7 883 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Afap1Q80YS6 731 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Rassf4Q8CB96 322 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ppp6r3Q922D4 844 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Rai14Q9EP71 979 aaKnown RBP12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Irx5Q9JKQ4 484 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Adamts13Q769J6 1426 aa12.96□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cdk4P30285 303 aa12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 CarsQ9ER72 831 aaKnown RBP12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 GsdmaQ9EST1 446 aa12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Prdm16A2A935 1275 aa12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 NexnQ7TPW1 607 aa12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Otud6bQ8K2H2 294 aa12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Nop14Q8R3N1 860 aaKnown RBP12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Creld2Q9CYA0 350 aa12.95□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cfap73J3QPZ5 306 aa12.94□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ice2Q3UZ18 988 aaKnown RBP12.94□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Frmd3Q8BHD4 595 aa12.94□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Pcmtd1P59913 357 aa12.94□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Nucb1Q02819 459 aaKnown RBP12.94□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Vwa3bJ9JI28 736 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Apaf1O88879 1249 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Anp32eP97822 260 aaKnown RBP12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ccdc162pQ0VG85 912 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Dixdc1Q80Y83 711 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Podxl2Q8CAE9 603 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Spag9Q58A65 1321 aaKnown RBP12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Abcc3B2RX12 1523 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 AatkQ80YE4 1365 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Atp7aQ64430 1491 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cgnl1Q6AW69 1298 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 St18Q80TY4 1045 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Nutm1Q8BHP2 1126 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cchcr1Q8K2I2 770 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Chaf1aQ9QWF0 911 aa12.93□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Klhl34A2AI76 644 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Sparcl1P70663 650 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cpa2Q504N0 417 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Zkscan4Q5SZT6 480 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Utp14aQ640M1 767 aaKnown RBP12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Mrps27Q8BK72 415 aaKnown RBP12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Naip7Q9JIB3 1402 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Brpf3B2KF05 1204 aaKnown RBP12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cfap157Q0VFX2 523 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 EcsitQ9QZH6 435 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Gm32742A0A1B0GT42 1604 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 NpatQ8BMA5 1420 aa12.92□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ctr9Q62018 1173 aaKnown RBP12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ncbp3Q8BZR9 615 aaKnown RBP12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ccdc60Q8C4J0 545 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Gprasp1Q5U4C1 1347 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Kidins220E9Q9B7 1793 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Psen1P49769 467 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Nol11Q8BJW5 723 aaKnown RBP12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ift57Q8BXG3 429 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Kansl3A2RSY1 903 aaKnown RBP12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Pdia3P27773 505 aaKnown RBP12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cep135Q6P5D4 1140 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ccz1Q8C1Y8 480 aa12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ccar2Q8VDP4 922 aaKnown RBP12.91□□□□□ -0.34
Rnf41-201ENSMUST00000096386 IbtkQ6ZPR6 1352 aaKnown RBP12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Itsn2Q9Z0R6 1659 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Ccdc171E9Q1U1 1324 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Samm50Q8BGH2 469 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Med4Q9CQA5 270 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Rbm33Q9CXK9 1231 aaKnown RBP12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Golga5Q9QYE6 729 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Zeb2Q9R0G7 1215 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Zkscan7E9PVW1 718 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Klra1P20937 262 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Tpm1P58771 284 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Tmx4Q8C0L0 335 aa12.9□□□□□ -0.34
Rnf41-201ENSMUST00000096386 Cd109Q8R422 1442 aa12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 TfrcQ62351 763 aaKnown RBP12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 MycbpQ9EQS3 103 aa12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 Zkscan16A2ALW2 728 aa12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 Rtf1A2AQ19 715 aaKnown RBP12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 Ap5z1Q3U829 807 aa12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 Nol10Q5RJG1 687 aaKnown RBP12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 Filip1lQ6P6L0 1131 aa12.89□□□□□ -0.35
Rnf41-201ENSMUST00000096386 Mcm3P25206 812 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms