RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 Hmgb2P30681 210 aaKnown RBP32.12■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Ssfa2Q922B9 1252 aa32.12■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Larp1bA0A0A6YXJ7 370 aaKnown RBP32.11■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Plin1Q8CGN5 517 aa32.11■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Kiaa1107Q80TK0 1369 aa32.1■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Mcm10Q0VBD2 885 aa32.1■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Fchsd2Q3USJ8 740 aa32.1■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Stk31Q99MW1 1018 aa32.1■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 ApobrQ8VBT6 942 aa32.09■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Atf7ipQ7TT18 1306 aa32.08■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Slc5a1Q8C3K6 665 aa32.08■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Rpgrip1lQ8CG73 1264 aa32.08■■■□□ 2.73
Ccdc50-202ENSMUST00000096127 Gm21663A0A0G2JE01 267 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Gm7361D3Z6R1 267 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 5031410I06RikE9Q4E0 267 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Gm1979E9QAN3 267 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Gm5862K7N5V5 267 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Gm10220K7N660 267 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Q7TT23 1179 aa32.07■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Aox2Q5SGK3 1345 aa32.06■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Pim2Q62070 370 aa32.06■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Pdzd9Q9D9M4 266 aa32.06■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Asic4Q7TNS7 539 aa32.05■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Iqcf3Q9D498 203 aa32.05■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Chmp7Q8R1T1 451 aa32.04■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Ccnl1Q52KE7 532 aaKnown RBP32.03■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 VirmaA2AIV2 1811 aaKnown RBP32.03■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Abca3Q8R420 1704 aa32.02■■■□□ 2.72
Ccdc50-202ENSMUST00000096127 Kiaa0319lQ8K135 1048 aa32.01■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Crb1Q8VHS2 1405 aa32■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 TmpoQ61033 693 aaKnown RBP32■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Trpm3Q5F4S9 1721 aa32■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Wwc2Q6NXJ0 1187 aa31.99■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Klc3Q91W40 508 aa31.99■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Exoc6Q8R313 802 aa31.97■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Shank3Q4ACU6 1730 aa31.97■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Ankrd13dQ6PD24 605 aa31.96■■■□□ 2.71
Ccdc50-202ENSMUST00000096127 Ezh2Q61188 746 aaKnown RBP31.94■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Q4VA45 678 aa31.93■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Hdac6Q9Z2V5 1149 aa31.93■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Ints5Q8CHT3 1018 aa31.92■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Ciz1Q8VEH2 845 aa31.92■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Znf541Q0GGX2 1363 aa31.92■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Q8BT18 775 aa31.91■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Cabp2Q9JLK4 216 aa31.91■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Tjp1P39447 1745 aaKnown RBP31.9■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Abcc12Q80WJ6 1366 aa31.9■■■□□ 2.7
Ccdc50-202ENSMUST00000096127 Tcerg1Q8CGF7 1100 aaKnown RBP31.88■■■□□ 2.69
Ccdc50-202ENSMUST00000096127 Mapk8ip3Q9ESN9 1337 aa31.87■■■□□ 2.69
Ccdc50-202ENSMUST00000096127 Zscan21Q07231 555 aa31.84■■■□□ 2.69
Ccdc50-202ENSMUST00000096127 Jmjd4Q8BFT6 427 aa31.83■■■□□ 2.69
Ccdc50-202ENSMUST00000096127 Ubr2Q6WKZ8 1755 aa31.82■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Map4k4P97820 1233 aaKnown RBP31.82■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Rtf1A2AQ19 715 aaKnown RBP31.81■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Atg3Q9CPX6 314 aa31.81■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Akt1s1Q9D1F4 257 aa31.81■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Apaf1O88879 1249 aa31.8■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Nkx2-3P97334 362 aa31.79■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Snap23O09044 210 aa31.78■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Golga2Q921M4 999 aa31.78■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Sos1Q62245 1319 aa31.77■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 CoblQ5NBX1 1337 aaKnown RBP31.76■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Igsf1Q7TQA1 1317 aa31.76■■■□□ 2.68
Ccdc50-202ENSMUST00000096127 Cavin4A2AMM0 362 aa31.76■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Fam198bQ3UPI1 517 aa31.76■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Kif23E9Q5G3 953 aa31.75■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Ccdc155Q80VJ8 648 aa31.75■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Dcaf5Q80T85 946 aa31.74■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Ric1Q69ZJ7 1422 aa31.74■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Usp19Q3UJD6 1360 aa31.73■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 AceP09470 1312 aa31.72■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Bicdl1A0JNT9 577 aa31.71■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Mrs2Q5NCE8 434 aa31.71■■■□□ 2.67
Ccdc50-202ENSMUST00000096127 Ccdc85cE9Q6B2 420 aa31.69■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Cap2Q9CYT6 476 aa31.69■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Esx1O88933 382 aa31.68■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Smg7Q5RJH6 1138 aaKnown RBP31.68■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Msh6P54276 1358 aaKnown RBP31.68■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Myo5bP21271 1818 aa31.67■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Adcy9P51830 1353 aa31.67■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Uhrf1bp1B2KF50 1429 aa31.66■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Gpr150Q8BL07 427 aa31.66■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Swt1Q9DBQ9 907 aa31.66■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 MeiocA2AG06 965 aa31.65■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Efcab2Q9CQ46 164 aa31.65■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Sall2Q9QX96 1004 aa31.65■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 Pde4dQ01063 747 aa31.64■■■□□ 2.66
Ccdc50-202ENSMUST00000096127 NppbP40753 121 aa31.63■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Btbd11Q6GQW0 1109 aa31.62■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Tiam2Q6ZPF3 1715 aa31.61■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Smarcc1P97496 1104 aa31.61■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Uspl1Q3ULM6 1089 aa31.61■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Trpc5Q9QX29 975 aa31.61■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Gm13023A2A8N2 498 aa31.6■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Dusp27Q148W8 1138 aa31.59■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Ncbp3Q8BZR9 615 aaKnown RBP31.59■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 AtrnQ9WU60 1428 aa31.58■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Kndc1Q0KK55 1742 aa31.58■■■□□ 2.65
Ccdc50-202ENSMUST00000096127 Spata31d1bE9QA57 1361 aa31.56■■■□□ 2.64
Ccdc50-202ENSMUST00000096127 Jdp2P97875 163 aa31.55■■■□□ 2.64
Retrieved 100 of 22,080 RNA–protein pairs in 317.5 ms