RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Fam135bQ9DAI6 1403 aa12.83□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Q3TQI7 289 aaKnown RBP12.83□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Ccar1Q8CH18 1146 aaKnown RBP12.83□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Scn7aB1AYL1 1681 aa12.82□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Larp1Q6ZQ58 1072 aaKnown RBP12.82□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Tet3Q8BG87 1668 aa12.82□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Zfp142G5E869 1843 aa12.81□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Bcl2l13P59017 434 aa12.81□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Fbxo41Q6NS60 873 aa12.81□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Slc5a1Q8C3K6 665 aa12.81□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Eif3bQ8JZQ9 803 aaKnown RBP12.81□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Upf2A2AT37 1269 aaKnown RBP12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Nectin2P32507 530 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Znf330Q922H9 316 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Pdzd9Q9D9M4 266 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Simc1E9Q6E9 1354 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Exoc5Q3TPX4 708 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Fbln2P37889 1221 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Rwdd1Q9CQK7 243 aa12.8□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Siglec1Q62230 1695 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 InhbeO08717 350 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 PtprvP70289 1705 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Btbd11Q6GQW0 1109 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Pm20d1Q8C165 503 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Sugp2Q8CH09 1067 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Phkg2Q9DB30 406 aa12.79□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 ApobrQ8VBT6 942 aa12.78□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Elp1Q7TT37 1333 aaKnown RBP12.78□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Cntnap1O54991 1385 aa12.78□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Bcl9lQ67FY2 1494 aa12.78□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Ddb1Q3U1J4 1140 aaKnown RBP12.77□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Asic4Q7TNS7 539 aa12.77□□□□□ -0.36
Ccdc38-201ENSMUST00000092215 Erbb3Q61526 1339 aa12.77□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Abca15E9PWH4 1668 aa12.77□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Ankrd50F7BE84 1390 aa12.77□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Plekhh1Q80TI1 1356 aa12.77□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Ptpn23Q6PB44 1692 aa12.77□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Aplp1Q03157 653 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Sos1Q62245 1319 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Spef2Q8C9J3 1734 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Fkbp4P30416 458 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 CastP51125 788 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Sik1Q60670 779 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 G3bp1P97855 465 aaKnown RBP12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Ccnl1Q52KE7 532 aaKnown RBP12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Q8BT18 775 aa12.76□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 NeflP08551 543 aa12.75□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Slit1Q80TR4 1531 aa12.75□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Nkx2-3P97334 362 aa12.75□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Ankrd23Q812A3 306 aa12.75□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Mdc1Q5PSV9 1707 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Calr4Q3TQS0 420 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Robo1O89026 1612 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Ttc21aQ8C0S4 1314 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Slit2Q9R1B9 1521 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Aox2Q5SGK3 1345 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Chpf2Q3UU43 768 aa12.74□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Nutm1Q8BHP2 1126 aa12.73□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Bsdc1Q80Y55 427 aa12.73□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Ginm1Q91WR6 327 aa12.73□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Uhrf1bp1B2KF50 1429 aa12.72□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Pank1Q8K4K6 548 aa12.72□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Cnnm1Q0GA42 951 aa12.72□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Vamp4O70480 141 aa12.71□□□□□ -0.37
Ccdc38-201ENSMUST00000092215 Kank1E9Q238 1360 aa12.7□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 MpndQ3TV65 487 aa12.7□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Lrp6O88572 1613 aa12.7□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ncbp3Q8BZR9 615 aaKnown RBP12.7□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Smg7Q5RJH6 1138 aaKnown RBP12.69□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Cypt2Q6P924 180 aa12.69□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Plekhm2Q80TQ5 1018 aa12.69□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Efcab2Q9CQ46 164 aa12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 PigbQ9JJQ0 542 aa12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Kcnh4A2A5F7 1018 aa12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Cyp2d12Q8BVD2 504 aa12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Clcn1Q64347 994 aa12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ahnak2E9PYB0 1738 aaKnown RBP12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Znf541Q0GGX2 1363 aa12.68□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Sv2bQ8BG39 683 aa12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Foxp4Q9DBY0 795 aaKnown RBP12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ccdc171E9Q1U1 1324 aa12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Taok3Q8BYC6 898 aa12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 TefQ9JLC6 301 aa12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Kcnh8P59111 1102 aa12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Eif4a1P60843 406 aaKnown RBP12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Akap11E9Q777 1895 aa12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Marf1Q8BJ34 1730 aaKnown RBP12.67□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Fam83gQ5SWY7 812 aa12.66□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ints5Q8CHT3 1018 aa12.66□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 KarsQ99MN1 595 aaKnown RBP12.66□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ric3Q8BPM6 367 aa12.66□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ppp1r3fQ9JIG4 799 aa12.66□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Prkab2Q6PAM0 271 aa12.65□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Slc39a6Q8C145 765 aa12.65□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 GckrQ91X44 587 aa12.65□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Arfgef2A2A5R2 1792 aa12.65□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Klc3Q91W40 508 aa12.65□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Ssfa2Q922B9 1252 aa12.65□□□□□ -0.38
Ccdc38-201ENSMUST00000092215 Bicdl1A0JNT9 577 aa12.65□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Fnbp4Q6ZQ03 1031 aa12.65□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms