RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Hecw2Q6I6G8 1578 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Catsper2A2ARP9 588 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Zbtb45Q52KG4 520 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Usp48Q3V0C5 1052 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Nlgn1Q99K10 843 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Uhrf1bp1lA2RSJ4 1457 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 AnkarA2RT91 1465 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 AampJ3QN89 436 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Zpr1Q62384 459 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Dzip1Q8BMD2 852 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ipo4Q8VI75 1082 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Phlpp2Q8BXA7 1320 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Polr3gQ6NXY9 223 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gcc1Q9D4H2 778 aa8.42□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gimap6Q8K349 305 aa8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ttc21aQ8C0S4 1314 aa8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Dixdc1Q80Y83 711 aa8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Cdc42bpbQ7TT50 1713 aa8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Abca6Q8K441 1624 aa8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Brd1E9PZ26 1189 aaKnown RBP8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 PsapQ61207 557 aaKnown RBP8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Erc2Q6PH08 957 aa8.41□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Sos1Q62245 1319 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 AU015836B2RUM3 263 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ppfia3P60469 1194 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 St18Q80TY4 1045 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Mad1l1Q9WTX8 717 aaKnown RBP8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Hecw1Q8K4P8 1604 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Plch2A2AP18 1501 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 TkfcQ8VC30 578 aa8.4□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Pa2g4P50580 394 aaKnown RBP8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Trim28Q62318 834 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 TefQ9JLC6 301 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Sytl4Q9R0Q1 673 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 PaskQ8CEE6 1383 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Tbc1d32Q3URV1 1296 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Kiaa0556Q8C753 1610 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Hoxc9P09633 260 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Mcm2P97310 904 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Mical1Q8VDP3 1048 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Farp2Q91VS8 1065 aa8.39□□□□□ -1.07
Col6a6-201ENSMUST00000060896 F2rP30558 430 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Igflr1Q3U4N7 345 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Slc39a6Q8C145 765 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Brf1Q8CFK2 676 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Wwc1Q5SXA9 1104 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Map3k2Q61083 619 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Ttc19Q8CC21 365 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Prdm2A2A7B5 1709 aaKnown RBP8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Gprasp1Q5U4C1 1347 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 ShprhQ7TPQ3 1674 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Terf2O35144 541 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 1700010I14RikQ7TPG0 532 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Pof1bQ8K4L4 587 aa8.38□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Cyb5rlB1AS42 316 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Smg7Q5RJH6 1138 aaKnown RBP8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Slc26a8Q8R0C3 999 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Tceanc2Q8R2M0 207 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Dmrtc1Q9D9R7 182 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Il1rapl2Q9ERS6 686 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Uggt2E9Q4X2 1504 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Ltv1Q6NSQ7 470 aaKnown RBP8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Smc3Q9CW03 1217 aaKnown RBP8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Atp6v1dP57746 247 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Robo2Q7TPD3 1470 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Anapc15P60007 132 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Kcnh5Q920E3 988 aa8.37□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Smarce1O54941 411 aaKnown RBP8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Hoxb7P09024 217 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Gpatch11Q3UFS4 262 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 GpkowQ56A08 488 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Ddx11Q6AXC6 880 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Prune1Q8BIW1 454 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Fam135bQ9DAI6 1403 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Pdia3P27773 505 aaKnown RBP8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Ankib1Q6ZPS6 1085 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 NexnQ7TPW1 607 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 KinQ8K339 391 aa8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Rrs1Q9CYH6 365 aaKnown RBP8.36□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Kidins220E9Q9B7 1793 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Abca9Q8K449 1623 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Pde3bQ61409 1100 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Soga3Q6NZL0 945 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Zkscan1Q8BGS3 561 aaKnown RBP8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Edc3Q8K2D3 508 aaKnown RBP8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Nsfl1cQ9CZ44 370 aaKnown RBP8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Kdm5aQ3UXZ9 1690 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Iqgap1Q9JKF1 1657 aaKnown RBP8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Nol11Q8BJW5 723 aaKnown RBP8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Slc5a1Q8C3K6 665 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Smc4Q8CG47 1286 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Slain2Q8CI08 581 aa8.35□□□□□ -1.07
Col6a6-201ENSMUST00000060896 KdrP35918 1367 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Strn4P58404 760 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Rims1Q99NE5 1463 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 IghaA0A0A6YXW6 389 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Znf326O88291 580 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 LifrP42703 1092 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Ercc3P49135 783 aa8.34□□□□□ -1.07
Col6a6-201ENSMUST00000060896 Prkab2Q6PAM0 271 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms