RNA–Protein interactions for RNA: ENSMUST00000059462.11

Chmp3-201, Transcript of Charged multivesicular body protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp3, Length 2,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp3-201ENSMUST00000059462 Zkscan16A2ALW2 728 aa14.35□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Puf60Q3UEB3 564 aaKnown RBP14.35□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Pik3r4Q8VD65 1358 aa14.35□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Hecw1Q8K4P8 1604 aa14.35□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Elp1Q7TT37 1333 aaKnown RBP14.35□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Hfm1D3Z4R1 1434 aa14.35□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Aldh8a1Q8BH00 487 aa14.34□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Q9D2X8 372 aa14.34□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Triml2E9PW10 424 aa14.34□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Dync1i1O88485 628 aa14.34□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Naa30Q8CES0 364 aa14.34□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Utp3Q9JI13 469 aaKnown RBP14.34□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Trpm1Q2TV84 1622 aa14.33□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Adgrl1Q80TR1 1466 aa14.33□□□□□ -0.11
Chmp3-201ENSMUST00000059462 Phactr2B1AVP0 632 aa14.33□□□□□ -0.12
Chmp3-201ENSMUST00000059462 CalcaP70160 136 aa14.33□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Vwa3bJ9JI28 736 aa14.33□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Abca9Q8K449 1623 aa14.33□□□□□ -0.12
Chmp3-201ENSMUST00000059462 ErbinQ80TH2 1402 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Fam184aE9PW83 1143 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Kcnf1Q7TSH7 493 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Gcc1Q9D4H2 778 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Usp54Q8BL06 1588 aaKnown RBP14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Cfap65Q3V0B4 1847 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Kif1bQ60575 1816 aaKnown RBP14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Vamp4O70480 141 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 EzrP26040 586 aaKnown RBP14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Bach1P97302 739 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Nol11Q8BJW5 723 aaKnown RBP14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Rab11fip3Q8CHD8 1047 aa14.32□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Fam43bA2AM80 330 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Filip1lQ6P6L0 1131 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 St18Q80TY4 1045 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Cdc37l1Q9CZP7 335 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Mmel1Q9JLI3 765 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 ShprhQ7TPQ3 1674 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 CebpzP53569 1052 aaKnown RBP14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Jph4Q80WT0 628 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Mrps27Q8BK72 415 aaKnown RBP14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 HnrnpuQ8VEK3 800 aaKnown RBP14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Hecw2Q6I6G8 1578 aa14.31□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Med14A2ABV5 1459 aaKnown RBP14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Samm50Q8BGH2 469 aa14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Swt1Q9DBQ9 907 aa14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Nucb2P81117 420 aa14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Erc2Q6PH08 957 aa14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Zranb1Q7M760 708 aa14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Gtpbp4Q99ME9 634 aaKnown RBP14.3□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Gm973E9Q295 1059 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Tpd52l1O54818 204 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Zfp51Q3U4L8 781 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Dnmt1P13864 1620 aaKnown RBP14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Cdc42bpbQ7TT50 1713 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Card6E9PWH2 1175 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Mcm3P25206 812 aaKnown RBP14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Tbc1d30Q69ZT9 766 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 InsrP15208 1372 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Cdk5rap2Q8K389 1822 aa14.29□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Oas2E9Q9A9 742 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Tbc1d8Q9Z1A9 1134 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Neurl4Q5NCX5 1563 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 PaskQ8CEE6 1383 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Mum1Q6DID5 682 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Mcm2P97310 904 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Mkrn3Q60764 544 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 CtifQ6PEE2 600 aaKnown RBP14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Cc2d1aQ8K1A6 943 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Ccdc96Q9CR92 584 aa14.28□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Safb2Q80YR5 991 aaKnown RBP14.27□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Adam1bQ8R534 806 aa14.27□□□□□ -0.12
Chmp3-201ENSMUST00000059462 Neo1P97798 1493 aa14.27□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Rtf1A2AQ19 715 aaKnown RBP14.27□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Prune1Q8BIW1 454 aa14.27□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Ssr1Q9CY50 286 aaKnown RBP14.27□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Exosc9Q9JHI7 438 aaKnown RBP14.27□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Uhrf1bp1B2KF50 1429 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Cfap73J3QPZ5 306 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 EvcP57680 1005 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Fam13aQ8BGI4 693 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Ric3Q8BPM6 367 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Ccar2Q8VDP4 922 aaKnown RBP14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Kif3bQ61771 747 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Prdm4Q80V63 803 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Frmd3Q8BHD4 595 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 PalmQ9Z0P4 383 aa14.26□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Abca8bQ8K440 1620 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Irx2P81066 474 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 U2surpQ6NV83 1029 aaKnown RBP14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Oxsr1Q6P9R2 527 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Zmynd15Q8C0R7 736 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Tshz3Q8CGV9 1081 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Riok3Q9DBU3 519 aaKnown RBP14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Cdkn1cP49919 348 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Utp14aQ640M1 767 aaKnown RBP14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 4930548H24RikQ9D496 437 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Cyp46a1Q9WVK8 500 aa14.25□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Rnf17Q99MV7 1640 aa14.24□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Brpf3B2KF05 1204 aaKnown RBP14.24□□□□□ -0.13
Chmp3-201ENSMUST00000059462 Slc12a5Q91V14 1138 aa14.24□□□□□ -0.13
Chmp3-201ENSMUST00000059462 LlphQ9D945 130 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms