RNA–Protein interactions for RNA: ENSMUST00000037903.14

Pkp4-201, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,378 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-201ENSMUST00000037903 Kdm5aQ3UXZ9 1690 aa13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 CalcaP70160 136 aa13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Ssh1Q76I79 1042 aa13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Ddx54Q8K4L0 874 aaKnown RBP13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Kidins220E9Q9B7 1793 aa13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Tbc1d32Q3URV1 1296 aa13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Dzip1Q8BMD2 852 aa13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Zcchc11B2RX14 1644 aaKnown RBP13.72□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Zap70P43404 618 aa13.71□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Gtf3c3Q3TMP1 882 aa13.71□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Uhrf1bp1lA2RSJ4 1457 aa13.71□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Farp2Q91VS8 1065 aa13.71□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Dixdc1Q80Y83 711 aa13.71□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Bcl11bQ99PV8 884 aa13.71□□□□□ -0.21
Pkp4-201ENSMUST00000037903 Uggt1Q6P5E4 1551 aa13.71□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Hoxc9P09633 260 aa13.7□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Astn2Q80Z10 1352 aa13.7□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Smc4Q8CG47 1286 aa13.7□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Dnajc5gQ8C632 165 aa13.69□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Myom2Q14BI5 1463 aa13.69□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Ubap1lG3UW59 384 aa13.69□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Nol8Q3UHX0 1147 aaKnown RBP13.69□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Babam1Q3UI43 333 aa13.69□□□□□ -0.22
Pkp4-201ENSMUST00000037903 KinQ8K339 391 aa13.69□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Ddx11Q6AXC6 880 aa13.68□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Slc35g1Q8BY79 368 aa13.68□□□□□ -0.22
Pkp4-201ENSMUST00000037903 PzpQ61838 1495 aa13.68□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Znf326O88291 580 aa13.68□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Kiaa1210E9Q0C6 1637 aa13.68□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Catsper2A2ARP9 588 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Plxnc1Q9QZC2 1574 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Nol11Q8BJW5 723 aaKnown RBP13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Ttc41Q692V3 1318 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Usp48Q3V0C5 1052 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Tshz3Q8CGV9 1081 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Terf2O35144 541 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 LifrP42703 1092 aa13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Cavin2Q63918 418 aaKnown RBP13.67□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Robo2Q7TPD3 1470 aa13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Dip2cE9PWR4 1557 aa13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Knl1Q66JQ7 1612 aa13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Smg7Q5RJH6 1138 aaKnown RBP13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Map3k2Q61083 619 aa13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Zkscan1Q8BGS3 561 aaKnown RBP13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Smc3Q9CW03 1217 aaKnown RBP13.66□□□□□ -0.22
Pkp4-201ENSMUST00000037903 FosbP13346 338 aa13.65□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Adgrb3Q80ZF8 1522 aa13.65□□□□□ -0.22
Pkp4-201ENSMUST00000037903 4930572O03RikQ8C5Y0 211 aa13.65□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Jarid2Q62315 1234 aa13.65□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Setd1aE9PYH6 1716 aa13.65□□□□□ -0.22
Pkp4-201ENSMUST00000037903 Ddx17Q501J6 650 aaKnown RBP13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Brf1Q8CFK2 676 aa13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Arhgap23Q69ZH9 1483 aa13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Mad1l1Q9WTX8 717 aaKnown RBP13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 NexnQ7TPW1 607 aa13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Rnf214Q8BFU3 668 aaKnown RBP13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Cep152A2AUM9 1736 aaKnown RBP13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Iqgap3F8VQ29 1632 aa13.64□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Slc26a8Q8R0C3 999 aa13.63□□□□□ -0.23
Pkp4-201ENSMUST00000037903 VgfQ0VGU4 617 aa13.63□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Cpa2Q504N0 417 aa13.63□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Adgrl1Q80TR1 1466 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Ttc19Q8CC21 365 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Amotl1Q9D4H4 968 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Ak9G3UYQ4 1894 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Pdia3P27773 505 aaKnown RBP13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Slain2Q8CI08 581 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Prex1Q69ZK0 1650 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Ints3Q7TPD0 1041 aaKnown RBP13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Slc5a1Q8C3K6 665 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Eif3bQ8JZQ9 803 aaKnown RBP13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Tmc1Q8R4P5 757 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Stard3nlQ9DCI3 235 aa13.62□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Pik3r4Q8VD65 1358 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Plekhg1F6S200 1446 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Rnf20Q5DTM8 973 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Top1mtQ8R4U6 593 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Abca9Q8K449 1623 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Lmod3E9QA62 571 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 PrkcshO08795 521 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Ncbp3Q8BZR9 615 aaKnown RBP13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 GpkowQ56A08 488 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Polr3gQ6NXY9 223 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 AnlnQ8K298 1121 aaKnown RBP13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Echdc1Q9D9V3 322 aa13.61□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Irf9Q61179 399 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Pa2g4P50580 394 aaKnown RBP13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 GckrQ91X44 587 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Q9D9S1 216 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Cep170bQ80U49 1574 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Ercc6l2Q9JIM3 1537 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Med14A2ABV5 1459 aaKnown RBP13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Atp8b2P98199 1209 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Fkbp5Q64378 456 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Aldh8a1Q8BH00 487 aa13.6□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Anapc15-psA0A140T8L6 141 aa13.59□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Pof1bQ8K4L4 587 aa13.59□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Eif3aP23116 1344 aaKnown RBP13.59□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Anapc15P60007 132 aa13.59□□□□□ -0.23
Pkp4-201ENSMUST00000037903 Ankib1Q6ZPS6 1085 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms