RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gcc1Q9D4H2 778 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Jakmip3Q5DTN8 844 aa19.67■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Tshz2Q68FE9 1030 aa19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Hap1O35668 628 aa19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 PhaxQ9JJT9 385 aaKnown RBP19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 DroshaQ5HZJ0 1373 aaKnown RBP19.66■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Cfap99A0A140LIX9 648 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Fam107bQ3TGF2 131 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Samd9lQ69Z37 1561 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 TnnQ80Z71 1560 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Cep135Q6P5D4 1140 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Ankrd24Q80VM7 985 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 LarsQ8BMJ2 1178 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Bag4Q8CI61 457 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 SelenooQ9DBC0 667 aa19.65■□□□□ 0.74
Col17a1-201ENSMUST00000026045 MvpQ9EQK5 861 aa19.64■□□□□ 0.74
Col17a1-201ENSMUST00000026045 Eif3aP23116 1344 aaKnown RBP19.64■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Gzf1Q4VBD9 706 aa19.64■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Rbm27Q5SFM8 1060 aaKnown RBP19.64■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Sh3bp1P55194 680 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 BcanQ61361 883 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 CarsQ9ER72 831 aaKnown RBP19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Atp7aQ64430 1491 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Pde1cQ64338 706 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Cwc27Q3TKY6 469 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 DonsonQ9QXP4 560 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Gnl2Q99LH1 728 aaKnown RBP19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Krt82Q99M74 516 aa19.63■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Il4rP16382 810 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Camsap2Q8C1B1 1461 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Trerf1Q8BXJ2 1205 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 AI481877A2ALV5 1481 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Zranb3Q6NZP1 1069 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Krt85Q9Z2T6 507 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Atp10dQ8K2X1 1416 aa19.62■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Secisbp2lQ6A098 1086 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Mmel1Q9JLI3 765 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Kank1E9Q238 1360 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Paip2Q9D6V8 124 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 WizO88286 1684 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Ranbp1P34022 203 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Eif5P59325 429 aaKnown RBP19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Hspa4Q61316 841 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Srgap3Q812A2 1099 aa19.61■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Gm18336A0A140LIU8 765 aa19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Zeb2Q9R0G7 1215 aa19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Psma5Q9Z2U1 241 aaKnown RBP19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Mcm3P25206 812 aaKnown RBP19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 PxdnQ3UQ28 1475 aa19.6■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Cnnm1Q0GA42 951 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Atf3Q60765 181 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 TmpoQ61033 693 aaKnown RBP19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Fancd2Q80V62 1450 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Wdr33Q8K4P0 1330 aaKnown RBP19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Rasa1E9PYG6 1038 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Ccdc73Q8CDM4 1066 aa19.59■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Cpa2Q504N0 417 aa19.58■□□□□ 0.73
Col17a1-201ENSMUST00000026045 SarnpQ9D1J3 210 aaKnown RBP19.58■□□□□ 0.73
Col17a1-201ENSMUST00000026045 Bbof1Q3V079 533 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Nbr1P97432 988 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Acbd3Q8BMP6 525 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Jakmip1Q8BVL9 626 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 RalgapbQ8BQZ4 1484 aa19.58■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Zkscan7E9PVW1 718 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Q9D9S1 216 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Rapgef6Q5NCJ1 1609 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Pla2r1Q62028 1487 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Aldh1l1Q8R0Y6 902 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Tmc1Q8R4P5 757 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 U2af2P26369 475 aaKnown RBP19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Mcm6P97311 821 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Als2cr12Q8BVM7 383 aa19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Snw1Q9CSN1 536 aaKnown RBP19.57■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Zpr1Q62384 459 aa19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ssr1Q9CY50 286 aaKnown RBP19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Hdgfl1Q2VPR5 283 aa19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Stk38Q91VJ4 465 aa19.56■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Evi5lH3BKQ3 813 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Smarcc1P97496 1104 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ppip5k2Q6ZQB6 1129 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Vps18Q8R307 973 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 TefQ9JLC6 301 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 CebpzP53569 1052 aaKnown RBP19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Dnajc5bQ9CQ94 199 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 PsapQ61207 557 aaKnown RBP19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ccdc186Q8C9S4 917 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Erlin2Q8BFZ9 340 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Slc12a5Q91V14 1138 aa19.55■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ppp1r15aP17564 657 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Plekhm2Q80TQ5 1018 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Zmym4A2A791 1549 aaKnown RBP19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Exoc6bA6H5Z3 810 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Pip4k2bQ80XI4 416 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 IncenpQ9WU62 880 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 CrcpO35427 148 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Map3k13Q1HKZ5 959 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Synpo2Q91YE8 1087 aaKnown RBP19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Sirt1Q923E4 737 aa19.54■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Nkx1-2P42580 305 aa19.53■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Trappc8E9PWG2 1437 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms