RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Abca8aQ8K442 1620 aa15.36■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Ccdc173A0JLY1 547 aa15.36■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Pof1bQ8K4L4 587 aa15.36■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Kiaa1107Q80TK0 1369 aa15.36■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Cnnm3Q32NY4 713 aa15.36■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Hnrnpul1Q8VDM6 859 aaKnown RBP15.36■□□□□ 0.05
Clcn3-201ENSMUST00000004430 KdrP35918 1367 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Efcab6Q6P1E8 1516 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Gadd45bP22339 160 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Ak9G3UYQ4 1894 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Topbp1Q6ZQF0 1515 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 TnikP83510 1323 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Gprasp1Q5U4C1 1347 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Depdc5P61460 1591 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Neurod6P48986 337 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Map3k13Q1HKZ5 959 aa15.35■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Brd1E9PZ26 1189 aaKnown RBP15.34■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Tmem131lQ3U3D7 1597 aa15.34■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Uggt1Q6P5E4 1551 aa15.34■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Gnai2P08752 355 aaKnown RBP15.34■□□□□ 0.05
Clcn3-201ENSMUST00000004430 AppP12023 770 aa15.34■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Ttc41Q692V3 1318 aa15.34■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Skint5A7XUY5 1461 aa15.33■□□□□ 0.05
Clcn3-201ENSMUST00000004430 Wwc1Q5SXA9 1104 aa15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Ints3Q7TPD0 1041 aaKnown RBP15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Gm10093D3YYI8 482 aa15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Hdac1O09106 482 aaKnown RBP15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Taf3Q5HZG4 932 aa15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Pde3bQ61409 1100 aa15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Yeats2Q3TUF7 1407 aa15.33■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Ptpdc1Q6NZK8 747 aa15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Ggt6Q6PDE7 497 aa15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Drc7Q6V3W6 876 aa15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Gdpd2Q9ESM6 539 aa15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Kif3aP28741 701 aa15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 AnlnQ8K298 1121 aaKnown RBP15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 IbtkQ6ZPR6 1352 aaKnown RBP15.32■□□□□ 0.04
Clcn3-201ENSMUST00000004430 BccipQ9CWI3 316 aa15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Ankrd44B2RXR6 993 aa15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 ImpactO55091 318 aa15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Pip4k2bQ80XI4 416 aa15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Mphosph10Q810V0 681 aaKnown RBP15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Prrc2bQ7TPM1 1486 aaKnown RBP15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Dip2cE9PWR4 1557 aa15.31■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Wdr78E9PYY5 807 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 EvcP57680 1005 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 TimelessQ9R1X4 1197 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Cdk5rap2Q8K389 1822 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Ehbp1l1Q99MS7 1716 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Cavin1O54724 392 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 EzrP26040 586 aaKnown RBP15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Fkbp4P30416 458 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Pank2Q3U4S0 443 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Trim27Q62158 513 aa15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Scaf11E9PZM7 1456 aaKnown RBP15.3■□□□□ 0.04
Clcn3-201ENSMUST00000004430 NcapgE9PWG6 1004 aa15.29■□□□□ 0.04
Clcn3-201ENSMUST00000004430 P2rx7Q9Z1M0 595 aa15.29■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Clasp1Q80TV8 1535 aaKnown RBP15.29■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Cdc42bpgQ80UW5 1551 aa15.29■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Hs1bp3Q3TC93 395 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Q9D9S1 216 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 TmpoQ61033 693 aaKnown RBP15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 FanciQ8K368 1330 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Cfap65Q3V0B4 1847 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Chd1lQ9CXF7 900 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 EappQ5BU09 281 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Ap3b2Q9JME5 1082 aa15.28■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Tmx3Q8BXZ1 456 aa15.27■□□□□ 0.04
Clcn3-201ENSMUST00000004430 Znf326O88291 580 aa15.27■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Ddx11Q6AXC6 880 aa15.27■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Ppp1r42Q8R1Z4 357 aa15.27■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Calcoco2A2A6M5 331 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Ppfia3P60469 1194 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Tecpr2Q3UH45 1423 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Mctp1E9PV86 951 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Gse1Q3U3C9 1213 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Fchsd2Q3USJ8 740 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Exoc6bA6H5Z3 810 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Hook1Q8BIL5 728 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 AglF8VPN4 1532 aa15.26■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Pdia3P27773 505 aaKnown RBP15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Dnajc5P60904 198 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Fam13aQ8BGI4 693 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Knl1Q66JQ7 1612 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 RereQ80TZ9 1558 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 A0A0U1RNP2 1173 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 F2rP30558 430 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Adcy5P84309 1262 aa15.25■□□□□ 0.03
Clcn3-201ENSMUST00000004430 DnmbpQ6TXD4 1580 aa15.24■□□□□ 0.03
Clcn3-201ENSMUST00000004430 TnmdQ9EP64 317 aa15.24■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Gjb2Q00977 226 aa15.23■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Vamp4O70480 141 aa15.23■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Hfm1D3Z4R1 1434 aa15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Dhx16G3X8X0 1044 aaKnown RBP15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Aifm3Q3TY86 605 aa15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Rnf20Q5DTM8 973 aa15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Q8C5K5 320 aa15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Bcl11bQ99PV8 884 aa15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 PdcQ9QW08 244 aa15.22■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Nol8Q3UHX0 1147 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms