RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 KLHL38Q2WGJ6 581 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 PEAR1Q5VY43 1037 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF470Q6ECI4 717 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 PACS1Q6VY07 963 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 PRR23BQ6ZRT6 265 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 MARK2Q7KZI7 788 aaKnown RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ARMCX6Q7L4S7 300 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 LDB1Q86U70 411 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 LRRC6Q86X45 466 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 SYT12Q8IV01 421 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 DENND6AQ8IWF6 608 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 CTAGE3PQ8IX95 158 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 RBFAQ8N0V3 343 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 OTUD6BQ8N6M0 293 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 PRSS33Q8NF86 280 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 DCUN1D1Q96GG9 259 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 SLC6A18Q96N87 628 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 CPNE1Q99829 537 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ARFGAP3Q9NP61 516 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 GPR27Q9NS67 375 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 FETUBQ9UGM5 382 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 OR1A2Q9Y585 309 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 MUC3AQ02505 3323 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 TLR4O00206 839 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 VILLO15195 856 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 CDK14O94921 469 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 AP2A2O94973 939 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 ASMTLO95671 621 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 WNT1P04628 370 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 NUDT17P0C025 328 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 RPS3P23396 243 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 GABRB3P28472 473 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 HOXD12P35452 270 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 SLC1A2P43004 574 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 THOP1P52888 689 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 CSE1LP55060 971 aaKnown RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 NFATC4Q14934 902 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 TEAD4Q15561 434 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 SMAD1Q15797 465 aaKnown RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 GRTP1Q5TC63 336 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 RABEPKQ7Z6M1 372 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 STRA8Q7Z7C7 330 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 ADGRG6Q86SQ4 1221 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 CNPY4Q8N129 248 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 PPM1NQ8N819 430 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 CEP76Q8TAP6 659 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 UHMK1Q8TAS1 419 aaKnown RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 WDR92Q96MX6 357 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 ZCCHC2Q9C0B9 1178 aaKnown RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 RMI1Q9H9A7 625 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 PPCSQ9HAB8 311 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 FBXO6Q9NRD1 293 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 TMEM74BQ9NUR3 256 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 ATXN10Q9UBB4 475 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 GPR34Q9UPC5 381 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 SLC17A4Q9Y2C5 497 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 OAS3Q9Y6K5 1087 aaKnown RBP12.18□□□□□ -0.46
LINC00339-213ENST00000642137 SLCO1B1Q9Y6L6 691 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 R4GN57 208 aa12.18□□□□□ -0.46
LINC00339-213ENST00000642137 SPTY2D1-AS1A0A0U1RR47 76 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 TMEM202A6NGA9 273 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 F8W8V4 182 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 QSOX1O00391 747 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 PRMT5O14744 637 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CHUKO15111 745 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 NUAK1O60285 661 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 OR1I1O60431 355 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 TCEA3O75764 348 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CEACAM5P06731 702 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 GP5P40197 560 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 MSH2P43246 934 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CD151P48509 253 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 AFF3P51826 1226 aaKnown RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 MPP1Q00013 466 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 B4GALNT1Q00973 533 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 GTF2H3Q13889 308 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 DUOXA1Q1HG43 343 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 KHDC1Q4VXA5 237 aaKnown RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF789Q5FWF6 425 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF648Q5T619 568 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CNSTQ6PJW8 725 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 ENPP7Q6UWV6 458 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 KDM7AQ6ZMT4 941 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 MACC1Q6ZN28 852 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 IQCKQ8N0W5 287 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 OR56A4Q8NGH8 313 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 PIGKQ92643 395 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF514Q96K75 400 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 BOCQ9BWV1 1114 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CLPBQ9H078 707 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms