RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 GPR160Q9UJ42 338 aa4.99□□□□□ -1.61
SCN1A-218ENST00000640036 C4AP0C0L4 1744 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SSU72P8A0A1W2PR75 194 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 C2orf74A8MZ97 194 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MMP20O60882 483 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NDST3O95803 873 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ICAM2P13598 275 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 POU1F1P28069 291 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CLCNKAP51800 687 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ARSFP54793 590 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CDH13P55290 713 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 GALNTL6Q49A17 601 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TRIM68Q6AZZ1 485 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TMEM151BQ8IW70 566 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SPEM1Q8N4L4 309 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 HNRNPABQ99729 332 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 KCNMB3Q9NPA1 279 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 DDX28Q9NUL7 540 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 KLRF1Q9NZS2 232 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 DNAJB4Q9UDY4 337 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 DKKL1Q9UK85 242 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SCML2Q9UQR0 700 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ACOT9Q9Y305 439 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CDK5RAP2Q96SN8 1893 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 BAZ2AQ9UIF9 1905 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RALGAPA1Q6GYQ0 2036 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ZBTB39O15060 712 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MT-CYBP00156 380 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SNRPAP09012 282 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 GJA5P36382 358 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NTHL1P78549 312 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RIN1Q13671 783 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 GRIN2CQ14957 1233 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SMU1Q2TAY7 513 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 C9orf64Q5T6V5 341 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 LAIR1Q6GTX8 287 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NUP54Q7Z3B4 507 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SLC47A2Q86VL8 602 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PLD3Q8IV08 490 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ANKMY2Q8IV38 441 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TCAIMQ8N3R3 496 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RNASE11Q8TAA1 199 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 THTPAQ9BU02 230 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CEP44Q9C0F1 390 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 KCNK12Q9HB15 430 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 WARS2Q9UGM6 360 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 AURKCQ9UQB9 309 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NAALADL1Q9UQQ1 740 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TLR6Q9Y2C9 796 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PCDHGB5Q9Y5G0 923 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CFAP73A6NFT4 308 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PRRG2O14669 202 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 GRID2O43424 1007 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 STX11O75558 287 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PMS1P54277 932 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ITGA1P56199 1179 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NAB2Q15742 525 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TMEM198Q66K66 360 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RNF19BQ6ZMZ0 732 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SH3RF1Q7Z6J0 888 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SLC35F6Q8N357 371 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 OR7D4Q8NG98 312 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 OR2AP1Q8NGE2 309 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF354BQ96LW1 612 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 BPIFA3Q9BQP9 254 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SLC4A5Q9BY07 1137 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF229Q9UJW7 825 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SIGLEC16A6NMB1 481 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PRMT5O14744 637 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CD3EAPO15446 510 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CYTH3O43739 400 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 IPO13O94829 963 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 IRF2P14316 349 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MYOGP15173 224 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF30P17039 623 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SLCO1A2P46721 670 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TMBIM6P55061 237 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 AUHQ13825 339 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RCN1Q15293 331 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 GPAT3Q53EU6 434 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RBM44Q6ZP01 1051 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 EPM2AIP1Q7L775 607 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 UBR7Q8N806 425 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 OR56A4Q8NGH8 313 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NEK7Q8TDX7 302 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 DQX1Q8TE96 717 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RLN3Q8WXF3 142 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 FAM162AQ96A26 154 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ASB2Q96Q27 587 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 KLHL25Q9H0H3 589 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 AVENQ9NQS1 362 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TMEM63CQ9P1W3 806 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 UPB1Q9UBR1 384 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PCDHGA2Q9Y5H1 932 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SCN9AQ15858 1988 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ABCA7Q8IZY2 2146 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 HYKKA2RU49 373 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ANKRD63C9JTQ0 380 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 INSIG1O15503 277 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms